RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ZSCAN5AQ9BUG6 496 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 TPPP3Q9BW30 176 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 ILKAPQ9H0C8 392 aaPredicted RBP2.93□□□□□ -1.94
HERC1-215ENST00000561436 RIBC2Q9H4K1 309 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 WDR76Q9H967 626 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 MRM3Q9HC36 420 aaKnown RBP2.93□□□□□ -1.94
HERC1-215ENST00000561436 APMAPQ9HDC9 416 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 SLC35D1Q9NTN3 355 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 IMPAD1Q9NX62 359 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 TMEM9Q9P0T7 183 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 RCOR3Q9P2K3 495 aaPredicted RBP2.93□□□□□ -1.94
HERC1-215ENST00000561436 MBD2Q9UBB5 411 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 LCMT1Q9UIC8 334 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 SH3BGRL2Q9UJC5 107 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 NXT1Q9UKK6 140 aaKnown RBP2.93□□□□□ -1.94
HERC1-215ENST00000561436 FOXJ3Q9UPW0 622 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 BTRCQ9Y297 605 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 NTNG1Q9Y2I2 539 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 HEBP2Q9Y5Z4 205 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 CACNA1EQ15878 2313 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 PCNX2A6NKB5 2137 aa2.93□□□□□ -1.94
HERC1-215ENST00000561436 FER1L5A0AVI2 2057 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 ANK1P16157 1881 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 A0A0J9YYE9 177 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 A0A1W2PPR1 153 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 ARGFXA6NJG6 315 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 KRTAP16-1A8MUX0 517 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 F8VZ95 297 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 PEX11AO75192 247 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 SCRG1O75711 98 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 KBTBD11O94819 623 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 SOD1P00441 154 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 RENP00797 406 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 TRBC1P01850 177 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 TPM2P07951 284 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 ZCCHC18P0CG32 403 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 UCHL3P15374 230 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 CALRP27797 417 aaKnown RBP2.92□□□□□ -1.94
HERC1-215ENST00000561436 RORAP35398 523 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 PEX19P40855 299 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 MDH1P40925 334 aaKnown RBP2.92□□□□□ -1.94
HERC1-215ENST00000561436 ACAA2P42765 397 aaKnown RBP2.92□□□□□ -1.94
HERC1-215ENST00000561436 PTGFRP43088 359 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 SPINT3P49223 89 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 FNTAP49354 379 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 OTUD4Q01804 1114 aaKnown RBP2.92□□□□□ -1.94
HERC1-215ENST00000561436 ZNF85Q03923 595 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 FUT7Q11130 342 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 NCF4Q15080 339 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 KRT71Q3SY84 523 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 HENMT1Q5T8I9 393 aaKnown RBP2.92□□□□□ -1.94
HERC1-215ENST00000561436 KCTD16Q68DU8 428 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 NIPAL3Q6P499 406 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 HSD11B1LQ7Z5J1 315 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 MYPOPQ86VE0 399 aaPredicted RBP2.92□□□□□ -1.94
HERC1-215ENST00000561436 OOSP2Q86WS3 158 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 ZNF573Q86YE8 665 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 HIPK1Q86Z02 1210 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 HSCBQ8IWL3 235 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 TRAM1L1Q8N609 369 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 ZNF491Q8N8L2 437 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 ACBD4Q8NC06 268 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 VN1R17PQ8TDU5 208 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 ITLN1Q8WWA0 313 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 THRSPQ92748 146 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 MCHR2Q969V1 340 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 UPRTQ96BW1 309 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 CXorf40BQ96DE9 158 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 RAB3CQ96E17 227 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 SDSLQ96GA7 329 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 TGM7Q96PF1 710 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 NUDT9Q9BW91 350 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 POLR1EQ9GZS1 481 aaKnown RBP2.92□□□□□ -1.94
HERC1-215ENST00000561436 TRABDQ9H4I3 376 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 WDR54Q9H977 334 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 GNB4Q9HAV0 340 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 SAMSN1Q9NSI8 373 aaKnown RBP2.92□□□□□ -1.94
HERC1-215ENST00000561436 PARVAQ9NVD7 372 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 ASF1BQ9NVP2 202 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 ADAM22Q9P0K1 906 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 RNF6Q9Y252 685 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 EXOSC1Q9Y3B2 195 aaKnown RBP2.92□□□□□ -1.94
HERC1-215ENST00000561436 SNX10Q9Y5X0 201 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 AP4B1Q9Y6B7 739 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 CELSR3Q9NYQ7 3312 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 ABCA7Q8IZY2 2146 aa2.92□□□□□ -1.94
HERC1-215ENST00000561436 TNRC6BQ9UPQ9 1833 aaKnown RBP2.91□□□□□ -1.94
HERC1-215ENST00000561436 ASCC3Q8N3C0 2202 aaKnown RBP2.91□□□□□ -1.94
HERC1-215ENST00000561436 TRAV17A0A0B4J275 112 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 A0A0U1RQV5 110 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 RNF222A6NCQ9 220 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 LRRC30A6NM36 301 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 E7EQ34 232 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 H0YL77 283 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 GOLGA8SH3BPF8 625 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.91□□□□□ -1.94
HERC1-215ENST00000561436 K7EPI3 171 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 E2F3O00716 465 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 CASKO14936 926 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 RHBDL1O75783 438 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms