RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 SDR39U1Q9NRG7 319 aaPredicted RBP10.16□□□□□ -0.78
CARMIL3-204ENST00000561354 ZIM2Q9NZV7 527 aa10.16□□□□□ -0.78
CARMIL3-204ENST00000561354 FBXL3Q9UKT7 428 aa10.16□□□□□ -0.78
CARMIL3-204ENST00000561354 POFUT2Q9Y2G5 429 aa10.16□□□□□ -0.78
CARMIL3-204ENST00000561354 A0A087WUJ7 227 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 A0A1B0GWA3 101 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 TMEM89A2RUT3 159 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 WIPF1O43516 503 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 MGRN1O60291 552 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 HPRP00739 348 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 NUDT7P0C024 238 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 T-ENOLP0DO92 83 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 GAAP10253 952 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 CD79AP11912 226 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 HLA-DOBP13765 273 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 TCN1P20061 433 aaPredicted RBP10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 HTR2AP28223 471 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 PRDX6P30041 224 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 ALDH3B1P43353 468 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 GIPRP48546 466 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 IDH3AP50213 366 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 RAB1AP62820 205 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 ELF3P78545 371 aaPredicted RBP10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 GALK2Q01415 458 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 PIGFQ07326 219 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 FADDQ13158 208 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 DNAL1Q4LDG9 190 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 C6orf10Q5SRN2 563 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 CARD17Q5XLA6 110 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 SHQ1Q6PI26 577 aaKnown RBP10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 EPGNQ6UW88 154 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 USP43Q70EL4 1123 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 OR51F2Q8NH61 342 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 FAM216AQ8WUB2 273 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 MAL2Q969L2 176 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 YIPF5Q969M3 257 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 SLC47A1Q96FL8 570 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 EPYCQ99645 322 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 SYT3Q9BQG1 590 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 CCDC28BQ9BUN5 200 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 EMC6Q9BV81 110 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 ZNF416Q9BWM5 594 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 RSPO3Q9BXY4 272 aaPredicted RBP10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 RAD21L1Q9H4I0 556 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 ZNF275Q9NSD4 429 aaPredicted RBP10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 TREM2Q9NZC2 230 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 ZNF224Q9NZL3 707 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 TAGLN3Q9UI15 199 aa10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 ZNF346Q9UL40 294 aaKnown RBP10.15□□□□□ -0.78
CARMIL3-204ENST00000561354 DYSFO75923 2080 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 TRAV20A0A0B4J274 112 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 ZNF726A6NNF4 738 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 CLIC1O00299 241 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 WNT9BO14905 357 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 RP2O75695 350 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 UBL3O95164 117 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 RAB36O95755 333 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 ANPEPP15144 967 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 B4GALT1P15291 398 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 CBLP22681 906 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 PTDSS1P48651 473 aaKnown RBP10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 POLR2JP52435 117 aaKnown RBP10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 HILS1P60008 231 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 LMO4P61968 165 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 NXNQ6DKJ4 435 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 DHRS4L2Q6PKH6 230 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 PXKQ7Z7A4 578 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 LRP11Q86VZ4 500 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 C3orf56Q8N813 242 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 OR6N1Q8NGY5 312 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 SGMS2Q8NHU3 365 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 GTF2H4Q92759 462 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 SLC7A6OSQ96CW6 309 aaPredicted RBP10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 CMTM5Q96DZ9 223 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 TXNDC15Q96J42 360 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 FOXB1Q99853 325 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 BTBD10Q9BSF8 475 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 ASPNQ9BXN1 380 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 ULBP2Q9BZM5 246 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 C1orf21Q9H246 121 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 NARFLQ9H6Q4 476 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 TCF7L2Q9NQB0 619 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 MED29Q9NX70 200 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 MRPL39Q9NYK5 338 aaKnown RBP10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 MYEF2Q9P2K5 600 aaKnown RBP10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 TESQ9UGI8 421 aaKnown RBP10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 SLC7A8Q9UHI5 535 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 PCDHB10Q9UN67 800 aa10.14□□□□□ -0.79
CARMIL3-204ENST00000561354 C5orf58C9J3I9 102 aa10.13□□□□□ -0.79
CARMIL3-204ENST00000561354 TRIM77I1YAP6 450 aa10.13□□□□□ -0.79
CARMIL3-204ENST00000561354 GYG2O15488 501 aa10.13□□□□□ -0.79
CARMIL3-204ENST00000561354 PPIHO43447 177 aaKnown RBP10.13□□□□□ -0.79
CARMIL3-204ENST00000561354 PNPP00491 289 aa10.13□□□□□ -0.79
CARMIL3-204ENST00000561354 BGLAPP02818 100 aa10.13□□□□□ -0.79
CARMIL3-204ENST00000561354 SERPINA5P05154 406 aa10.13□□□□□ -0.79
CARMIL3-204ENST00000561354 NAT2P11245 290 aa10.13□□□□□ -0.79
CARMIL3-204ENST00000561354 HOXB9P17482 250 aaPredicted RBP10.13□□□□□ -0.79
CARMIL3-204ENST00000561354 EGR1P18146 543 aa10.13□□□□□ -0.79
CARMIL3-204ENST00000561354 ACTG1P63261 375 aa10.13□□□□□ -0.79
CARMIL3-204ENST00000561354 MYBPC1Q00872 1141 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms