RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 POLR2JP52435 117 aaKnown RBP8.47□□□□□ -1.05
TPM1-225ENST00000560679 CLNS1AP54105 237 aaKnown RBP8.47□□□□□ -1.05
TPM1-225ENST00000560679 TMEM33P57088 247 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 ARF1P84077 181 aaKnown RBP8.47□□□□□ -1.05
TPM1-225ENST00000560679 MS4A2Q01362 244 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 BNIP2Q12982 314 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 MAD2L1Q13257 205 aaPredicted RBP8.47□□□□□ -1.05
TPM1-225ENST00000560679 TRIM25Q14258 630 aaKnown RBP8.47□□□□□ -1.05
TPM1-225ENST00000560679 AVPI1Q5T686 147 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 ACSM5Q6NUN0 579 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 DOK3Q7L591 496 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 C16orf62Q7Z3J2 963 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 C6orf120Q7Z4R8 191 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 SPATA24Q86W54 205 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 CLECL1Q8IZS7 167 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 NANPQ8TBE9 248 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 MIPOL1Q8TD10 442 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 OIT3Q8WWZ8 545 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 PMM1Q92871 262 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 COQ8BQ96D53 544 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 MS4A3Q96HJ5 214 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 ZNF75AQ96N20 296 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 ECSITQ9BQ95 431 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 LINC00470Q9BZP3 86 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 TRIM15Q9C019 465 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 OR51I1Q9H343 314 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 NTN4Q9HB63 628 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 CRLF2Q9HC73 371 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 BATF3Q9NR55 127 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 ASIC5Q9NY37 505 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 LEF1Q9UJU2 399 aaPredicted RBP8.47□□□□□ -1.05
TPM1-225ENST00000560679 FZR1Q9UM11 496 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 WDR45Q9Y484 360 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 DNAH3Q8TD57 4116 aa8.47□□□□□ -1.05
TPM1-225ENST00000560679 PRORSD1PA6NEY8 169 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 CCDC154A6NI56 674 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 DUXAA6NLW8 204 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 VSTM5A8MXK1 200 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 NME4O00746 187 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 ZNF432O94892 652 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 C1QCP02747 245 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 GPIP06744 558 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 OR12D1P0DN82 309 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 NAT2P11245 290 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 HSD17B1P14061 328 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 PEX2P28328 305 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 MSX2P35548 267 aaPredicted RBP8.46□□□□□ -1.06
TPM1-225ENST00000560679 ARR3P36575 388 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 RPL3P39023 403 aaKnown RBP8.46□□□□□ -1.06
TPM1-225ENST00000560679 MAGEB1P43366 347 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 UFM1P61960 85 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 KCNJ10P78508 379 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 NFYCQ13952 458 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 FXNQ16595 210 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 ZNF311Q5JNZ3 666 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 C6orf10Q5SRN2 563 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 OGFRL1Q5TC84 451 aaPredicted RBP8.46□□□□□ -1.06
TPM1-225ENST00000560679 DCAF12L2Q5VW00 463 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 TNFAIP8L2Q6P589 184 aaPredicted RBP8.46□□□□□ -1.06
TPM1-225ENST00000560679 ARPINQ7Z6K5 226 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 RIMKLAQ8IXN7 391 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 FAM156AQ8NDB6 213 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 DUS3LQ96G46 650 aaKnown RBP8.46□□□□□ -1.06
TPM1-225ENST00000560679 ZNF48Q96MX3 618 aaPredicted RBP8.46□□□□□ -1.06
TPM1-225ENST00000560679 ZBTB18Q99592 522 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 ZNF416Q9BWM5 594 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 SLITRK2Q9H156 845 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 MUC13Q9H3R2 512 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 MS4A5Q9H3V2 200 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 POLE3Q9NRF9 147 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 MED29Q9NX70 200 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 B3GNT2Q9NY97 397 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 RIMS3Q9UJD0 308 aa8.46□□□□□ -1.06
TPM1-225ENST00000560679 TCRBV3S1A0A5B6 114 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 FAAHO00519 579 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 NPPAP01160 153 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 HLA-HP01893 362 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 RNASE1P07998 156 aaKnown RBP8.45□□□□□ -1.06
TPM1-225ENST00000560679 CHRM4P08173 479 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 ZNF35P13682 527 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 ZNF14P17017 642 aaPredicted RBP8.45□□□□□ -1.06
TPM1-225ENST00000560679 MDKP21741 143 aaPredicted RBP8.45□□□□□ -1.06
TPM1-225ENST00000560679 SLC6A2P23975 617 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 IL12AP29459 219 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 IL13RA1P78552 427 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 MVKQ03426 396 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 SRSF4Q08170 494 aaKnown RBP8.45□□□□□ -1.06
TPM1-225ENST00000560679 BLMHQ13867 455 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 IL23RQ5VWK5 629 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 LPCAT4Q643R3 524 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 SLC15A3Q8IY34 581 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 DPP10Q8N608 796 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 RAB8BQ92930 207 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 VPS33AQ96AX1 596 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 TEX37Q96LM6 180 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 LRGUKQ96M69 825 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 PKP2Q99959 881 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 DUSP26Q9BV47 211 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 GPR35Q9HC97 309 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 EXD2Q9NVH0 621 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms