RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 SNTB2Q13425 540 aaKnown RBP12.21□□□□□ -0.45
TPM1-223ENST00000560445 CAMK2DQ13557 499 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 CARTPTQ16568 116 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 MST1LQ2TV78 715 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 SLC36A2Q495M3 483 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 TMEM53Q6P2H8 277 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 UNQ6126/PRO20091Q6UXV3 157 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 SPATA21Q7Z572 469 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 GPR32P1Q8NGA4 272 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 FNDC8Q8TC99 324 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 KCNK17Q96T54 332 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 ZNF426Q9BUY5 554 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 EMC6Q9BV81 110 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 NDEL1Q9GZM8 345 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 LRMDAQ9H2I8 198 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 MS4A5Q9H3V2 200 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 NOX3Q9HBY0 568 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 FGFR1OP2Q9NVK5 253 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 GLTPQ9NZD2 209 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 ZNF346Q9UL40 294 aaKnown RBP12.21□□□□□ -0.45
TPM1-223ENST00000560445 SH3GLB1Q9Y371 365 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 CAPN7Q9Y6W3 813 aa12.21□□□□□ -0.45
TPM1-223ENST00000560445 HLA-HP01893 362 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 MT-ND1P03886 318 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 HLA-DOBP13765 273 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 B4GALT1P15291 398 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 PCMT1P22061 227 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 NR4A1P22736 598 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 CALCRP30988 508 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 THBS4P35443 961 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 NR4A2P43354 598 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 PTDSS1P48651 473 aaKnown RBP12.2□□□□□ -0.46
TPM1-223ENST00000560445 CLRN1P58418 232 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 SELPLGQ14242 412 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 IQCCQ4KMZ1 466 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 CARM1Q86X55 608 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 PRIMA1Q86XR5 153 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 OR1J2Q8NGS2 313 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 TMEM54Q969K7 222 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 SORCS2Q96PQ0 1159 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 BEX2Q9BXY8 128 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 KCNN2Q9H2S1 579 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 B3GNT2Q9NY97 397 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 SLC7A8Q9UHI5 535 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 KCNS2Q9ULS6 477 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 MED31Q9Y3C7 131 aa12.2□□□□□ -0.46
TPM1-223ENST00000560445 ATRQ13535 2644 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 A0A096LNT2 108 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 NPIPB13A6NJU9 1138 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 FAM220BPB1ANY3 271 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 NPIPB4C9JG80 1138 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 M0R233 179 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 KPNA4O00629 521 aaPredicted RBP12.19□□□□□ -0.46
TPM1-223ENST00000560445 SYNGR3O43761 229 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 ASAH2BP0C7U1 165 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 FAM157CP0CG43 387 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 APEHP13798 732 aaKnown RBP12.19□□□□□ -0.46
TPM1-223ENST00000560445 DAOP14920 347 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 GLRXP35754 106 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 CHN2P52757 468 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 RAB1AP62820 205 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 GUCY1A3Q02108 690 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 HGFACQ04756 655 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 PLP2Q04941 152 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 ST3GAL3Q11203 375 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 KLF10Q13118 480 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 GGTLC2Q14390 218 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 TAF11Q15544 211 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 FAM166AQ6J272 317 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 DEF8Q6ZN54 512 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 CALHM3Q86XJ0 350 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 OR2T12Q8NG77 320 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 HTRA1Q92743 480 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 SGTBQ96EQ0 304 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 TXNDC15Q96J42 360 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 RSPO3Q9BXY4 272 aaPredicted RBP12.19□□□□□ -0.46
TPM1-223ENST00000560445 SHARPINQ9H0F6 387 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 SAR1AQ9NR31 198 aa12.19□□□□□ -0.46
TPM1-223ENST00000560445 LOC100653049A0A140TA62 436 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 VWC2LB2RUY7 222 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 BLOC1S5-TXNDC5H3BN57 136 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 FBP2O00757 339 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 DHHO43323 396 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 CCDC22O60826 627 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 KRT34O76011 436 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 SEC14L2O76054 403 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 MT-ND5P03915 603 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 SERPINA5P05154 406 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 CELA3BP08861 270 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 ZNF14P17017 642 aaPredicted RBP12.18□□□□□ -0.46
TPM1-223ENST00000560445 GUCA1AP43080 201 aaPredicted RBP12.18□□□□□ -0.46
TPM1-223ENST00000560445 GIPRP48546 466 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 MOGQ16653 247 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 ANKDD1AQ495B1 522 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 LRRC23Q53EV4 343 aaPredicted RBP12.18□□□□□ -0.46
TPM1-223ENST00000560445 RABL3Q5HYI8 236 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 FAM205BPQ63HN1 556 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 KRT80Q6KB66 452 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 SVOPLQ8N434 492 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 SLC22A24Q8N4F4 322 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms