RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 WDR88Q6ZMY6 472 aa18.16■□□□□ 0.5
PSEN1-225ENST00000560005 FAM214BQ7L5A3 538 aa18.16■□□□□ 0.5
PSEN1-225ENST00000560005 OR4K17Q8NGC6 315 aa18.16■□□□□ 0.5
PSEN1-225ENST00000560005 SGTBQ96EQ0 304 aa18.16■□□□□ 0.5
PSEN1-225ENST00000560005 NDEL1Q9GZM8 345 aa18.16■□□□□ 0.5
PSEN1-225ENST00000560005 SLC25A19Q9HC21 320 aa18.16■□□□□ 0.5
PSEN1-225ENST00000560005 SCN3BQ9NY72 215 aa18.16■□□□□ 0.5
PSEN1-225ENST00000560005 ZNF175Q9Y473 711 aa18.16■□□□□ 0.5
PSEN1-225ENST00000560005 CDH10Q9Y6N8 788 aa18.16■□□□□ 0.5
PSEN1-225ENST00000560005 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.16■□□□□ 0.5
PSEN1-225ENST00000560005 OVOL3O00110 214 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 HMGN1P05114 100 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 FAM157CP0CG43 387 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 FKBP2P26885 142 aaKnown RBP18.15■□□□□ 0.5
PSEN1-225ENST00000560005 EPHA2P29317 976 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 TACR3P29371 465 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 CDKN1AP38936 164 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 DSCR4P56555 118 aaPredicted RBP18.15■□□□□ 0.5
PSEN1-225ENST00000560005 CD47Q08722 323 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 CDK5R2Q13319 367 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 BLMHQ13867 455 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 MAD2L1BPQ15013 274 aaPredicted RBP18.15■□□□□ 0.5
PSEN1-225ENST00000560005 QPRTQ15274 297 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 KRTAP24-1Q3LI83 254 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 RAET1LQ5VY80 246 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 SLC27A4Q6P1M0 643 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 TMEM154Q6P9G4 183 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 STAC2Q6ZMT1 411 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 OR52L1Q8NGH7 329 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 FAM81AQ8TBF8 368 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 Q96MT0 163 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 RTN4RQ9BZR6 473 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 SLCO5A1Q9H2Y9 848 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 TPRKBQ9Y3C4 175 aa18.15■□□□□ 0.5
PSEN1-225ENST00000560005 A0A087WZY1 265 aa18.14■□□□□ 0.49
PSEN1-225ENST00000560005 SOD3P08294 240 aa18.14■□□□□ 0.49
PSEN1-225ENST00000560005 SAGP10523 405 aaPredicted RBP18.14■□□□□ 0.49
PSEN1-225ENST00000560005 APOBEC1P41238 236 aaKnown RBP18.14■□□□□ 0.49
PSEN1-225ENST00000560005 GPR4P46093 362 aa18.14■□□□□ 0.49
PSEN1-225ENST00000560005 ZNF41P51814 821 aaPredicted RBP18.14■□□□□ 0.49
PSEN1-225ENST00000560005 CDK5Q00535 292 aa18.14■□□□□ 0.49
PSEN1-225ENST00000560005 GINS1Q14691 196 aa18.14■□□□□ 0.49
PSEN1-225ENST00000560005 RHOXF1Q8NHV9 184 aa18.14■□□□□ 0.49
PSEN1-225ENST00000560005 ZNF566Q969W8 418 aa18.14■□□□□ 0.49
PSEN1-225ENST00000560005 SLC38A2Q96QD8 506 aa18.14■□□□□ 0.49
PSEN1-225ENST00000560005 MRPS26Q9BYN8 205 aaKnown RBP18.14■□□□□ 0.49
PSEN1-225ENST00000560005 BAIAP2Q9UQB8 552 aa18.14■□□□□ 0.49
PSEN1-225ENST00000560005 ZNF337Q9Y3M9 751 aa18.14■□□□□ 0.49
PSEN1-225ENST00000560005 SVEP1Q4LDE5 3571 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 A0A087WXM4 84 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 H3BML4 177 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 PIP5K1CO60331 668 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 AQP8O94778 261 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 HK1P19367 917 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 CLDN20P56880 219 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 GABARAPL2P60520 117 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 SNRPGP62308 76 aaKnown RBP18.13■□□□□ 0.49
PSEN1-225ENST00000560005 TUBA4AP68366 448 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 C12orf73Q69YU5 71 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 ALKBH2Q6NS38 261 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 ZNF620Q6ZNG0 422 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 PTCHD4Q6ZW05 846 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 TSPAN14Q8NG11 270 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 OR8J1Q8NGP2 316 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 OR5M1Q8NGP8 315 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 STK35Q8TDR2 534 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 LIPHQ8WWY8 451 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 GPA33Q99795 319 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 ACTR6Q9GZN1 396 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 DSN1Q9H410 356 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 MEPEQ9NQ76 525 aaPredicted RBP18.13■□□□□ 0.49
PSEN1-225ENST00000560005 TBC1D23Q9NUY8 699 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 CLN6Q9NWW5 311 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 OSGIN1Q9UJX0 560 aa18.13■□□□□ 0.49
PSEN1-225ENST00000560005 M0R3G1 203 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 ETV2O00321 342 aaPredicted RBP18.12■□□□□ 0.49
PSEN1-225ENST00000560005 MRPS14O60783 128 aaKnown RBP18.12■□□□□ 0.49
PSEN1-225ENST00000560005 SOX14O95416 240 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 IGHV4-39P01824 125 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 MAKP20794 623 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 EIF1P41567 113 aaKnown RBP18.12■□□□□ 0.49
PSEN1-225ENST00000560005 ZBED5Q49AG3 693 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 SLC25A53Q5H9E4 307 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 MEDAGQ5VYS4 303 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 DNM1P46Q6ZS02 220 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 OAFQ86UD1 273 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 ENTHD1Q8IYW4 607 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 OR2T33Q8NG76 320 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 OR6S1Q8NH40 331 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 LILRB1Q8NHL6 650 aaPredicted RBP18.12■□□□□ 0.49
PSEN1-225ENST00000560005 PFN4Q8NHR9 129 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 MRGPRX4Q96LA9 322 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 TSSK6Q9BXA6 273 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 CCNB1IP1Q9NPC3 277 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 PLSCR4Q9NRQ2 329 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 PLCXD1Q9NUJ7 323 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 MED17Q9NVC6 651 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 CDC42EP3Q9UKI2 254 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 CLEC4AQ9UMR7 237 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 EMC9Q9Y3B6 208 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms