RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 MT-ND1P03886 318 aa15.37■□□□□ 0.05
TPM1-218ENST00000559281 ASAH2BP0C7U1 165 aa15.37■□□□□ 0.05
TPM1-218ENST00000559281 NR4A1P22736 598 aa15.37■□□□□ 0.05
TPM1-218ENST00000559281 IFNA8P32881 189 aa15.37■□□□□ 0.05
TPM1-218ENST00000559281 LSP1P33241 339 aa15.37■□□□□ 0.05
TPM1-218ENST00000559281 RBM34P42696 430 aaKnown RBP15.37■□□□□ 0.05
TPM1-218ENST00000559281 PTDSS1P48651 473 aaKnown RBP15.37■□□□□ 0.05
TPM1-218ENST00000559281 RAB1AP62820 205 aa15.37■□□□□ 0.05
TPM1-218ENST00000559281 CHRFAM7AQ494W8 412 aa15.37■□□□□ 0.05
TPM1-218ENST00000559281 HSP90B2PQ58FF3 399 aa15.37■□□□□ 0.05
TPM1-218ENST00000559281 C6orf52Q5T4I8 152 aa15.37■□□□□ 0.05
TPM1-218ENST00000559281 NANOGNBQ7Z5D8 188 aa15.37■□□□□ 0.05
TPM1-218ENST00000559281 MYPOPQ86VE0 399 aaPredicted RBP15.37■□□□□ 0.05
TPM1-218ENST00000559281 LRRC17Q8N6Y2 441 aa15.37■□□□□ 0.05
TPM1-218ENST00000559281 NEU4Q8WWR8 484 aaPredicted RBP15.37■□□□□ 0.05
TPM1-218ENST00000559281 TMEM54Q969K7 222 aa15.37■□□□□ 0.05
TPM1-218ENST00000559281 ZNF583Q96ND8 569 aa15.37■□□□□ 0.05
TPM1-218ENST00000559281 DOK1Q99704 481 aa15.37■□□□□ 0.05
TPM1-218ENST00000559281 NOX3Q9HBY0 568 aa15.37■□□□□ 0.05
TPM1-218ENST00000559281 ADAM21Q9UKJ8 722 aa15.37■□□□□ 0.05
TPM1-218ENST00000559281 AP3M1Q9Y2T2 418 aa15.37■□□□□ 0.05
TPM1-218ENST00000559281 SONP18583 2426 aaKnown RBP15.37■□□□□ 0.05
TPM1-218ENST00000559281 A0A1W2PRG6 482 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 FXYD1O00168 92 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 SLC22A2O15244 555 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 OR5F1O95221 314 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 FARS2O95363 451 aaKnown RBP15.36■□□□□ 0.05
TPM1-218ENST00000559281 IGF2P01344 180 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 OR8G3PP0DMU2 310 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 THRBP10828 461 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 FUT1P19526 365 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 NR4A2P43354 598 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 GZMKP49863 264 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 CRYBA2P53672 197 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 GALK2Q01415 458 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 SF3A3Q12874 501 aaKnown RBP eCLIP15.36■□□□□ 0.059e-9■■■■□ 23.4
TPM1-218ENST00000559281 SNTB2Q13425 540 aaKnown RBP15.36■□□□□ 0.05
TPM1-218ENST00000559281 KRT80Q6KB66 452 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 PODNL1Q6PEZ8 512 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 DEF8Q6ZN54 512 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 HDDC2Q7Z4H3 204 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 DPPA2Q7Z7J5 298 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 ANKS4BQ8N8V4 417 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 FOXN4Q96NZ1 517 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 KCNK17Q96T54 332 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 PRSS27Q9BQR3 290 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 DYNLRB1Q9NP97 96 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 RIMS3Q9UJD0 308 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 CDC42EP3Q9UKI2 254 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 CAPN7Q9Y6W3 813 aa15.36■□□□□ 0.05
TPM1-218ENST00000559281 SH3PXD2BA1X283 911 aa15.35■□□□□ 0.05
TPM1-218ENST00000559281 DHHO43323 396 aa15.35■□□□□ 0.05
TPM1-218ENST00000559281 IGHG1P01857 330 aa15.35■□□□□ 0.05
TPM1-218ENST00000559281 ZNF14P17017 642 aaPredicted RBP15.35■□□□□ 0.05
TPM1-218ENST00000559281 KDELR2P33947 212 aa15.35■□□□□ 0.05
TPM1-218ENST00000559281 GIPRP48546 466 aa15.35■□□□□ 0.05
TPM1-218ENST00000559281 EVX1P49640 407 aa15.35■□□□□ 0.05
TPM1-218ENST00000559281 RPS23P62266 143 aaKnown RBP15.35■□□□□ 0.05
TPM1-218ENST00000559281 GGTLC2Q14390 218 aa15.35■□□□□ 0.05
TPM1-218ENST00000559281 IQCCQ4KMZ1 466 aa15.35■□□□□ 0.05
TPM1-218ENST00000559281 GKAP1Q5VSY0 366 aaPredicted RBP15.35■□□□□ 0.05
TPM1-218ENST00000559281 TSPYL5Q86VY4 417 aaPredicted RBP15.35■□□□□ 0.05
TPM1-218ENST00000559281 SVOPLQ8N434 492 aa15.35■□□□□ 0.05
TPM1-218ENST00000559281 SLC22A24Q8N4F4 322 aa15.35■□□□□ 0.05
TPM1-218ENST00000559281 OR2T12Q8NG77 320 aa15.35■□□□□ 0.05
TPM1-218ENST00000559281 TMEM239Q8WW34 195 aa15.35■□□□□ 0.05
TPM1-218ENST00000559281 LZICQ8WZA0 190 aa15.35■□□□□ 0.05
TPM1-218ENST00000559281 SGTBQ96EQ0 304 aa15.35■□□□□ 0.05
TPM1-218ENST00000559281 MS4A3Q96HJ5 214 aa15.35■□□□□ 0.05
TPM1-218ENST00000559281 MEPEQ9NQ76 525 aaPredicted RBP15.35■□□□□ 0.05
TPM1-218ENST00000559281 TMEM160Q9NX00 188 aa15.35■□□□□ 0.05
TPM1-218ENST00000559281 STX18Q9P2W9 335 aaKnown RBP15.35■□□□□ 0.05
TPM1-218ENST00000559281 HTR3EA5X5Y0 456 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 FAM220BPB1ANY3 271 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 CENPBD1B2RD01 187 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 VWC2LB2RUY7 222 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 MCIDASD6RGH6 385 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 MGRN1O60291 552 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 SERPINA5P05154 406 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 QDPRP09417 244 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 ZNF35P13682 527 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 GLRXP35754 106 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 CLRN1P58418 232 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 PIN1Q13526 163 aaPredicted RBP15.34■□□□□ 0.05
TPM1-218ENST00000559281 MELKQ14680 651 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 LRRC23Q53EV4 343 aaPredicted RBP15.34■□□□□ 0.05
TPM1-218ENST00000559281 LRFN4Q6PJG9 635 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 ARPINQ7Z6K5 226 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 WDFY1Q8IWB7 410 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 SKA3Q8IX90 412 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 RP9Q8TA86 221 aaKnown RBP15.34■□□□□ 0.05
TPM1-218ENST00000559281 ZNF75AQ96N20 296 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 MS4A5Q9H3V2 200 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 CCDC134Q9H6E4 229 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 LPAR3Q9UBY5 353 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 MED31Q9Y3C7 131 aa15.34■□□□□ 0.05
TPM1-218ENST00000559281 TMEM129A0AVI4 362 aa15.33■□□□□ 0.04
TPM1-218ENST00000559281 ELOVL7A1L3X0 281 aa15.33■□□□□ 0.04
TPM1-218ENST00000559281 OR7A10O76100 309 aa15.33■□□□□ 0.04
TPM1-218ENST00000559281 PTHP01270 115 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms