RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 PLEKHM3Q6ZWE6 761 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 C16orf62Q7Z3J2 963 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 SERPINA11Q86U17 422 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 TMEM200AQ86VY9 491 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 PTOV1Q86YD1 416 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 GRAMD2AQ8IUY3 354 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 CNPY4Q8N129 248 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 ZNF619Q8N2I2 560 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 ARFGAP2Q8N6H7 521 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 NATD1Q8N6N6 113 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 TMCO5AQ8N6Q1 288 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 CNEP1R1Q8N9A8 125 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 OR52N4Q8NGI2 321 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 OR52P1PQ8NH57 321 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 OR5W2Q8NH69 310 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 OR2V1Q8NHB1 315 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 NFKBIDQ8NI38 313 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 FAM110DQ8TAY7 271 aaPredicted RBP3.74□□□□□ -1.81
SPG11-211ENST00000558561 BCAS4Q8TDM0 211 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 ABHD3Q8WU67 409 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 C10orf82Q8WW14 230 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 ASB5Q8WWX0 329 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 ZC3HAV1LQ96H79 300 aaKnown RBP3.74□□□□□ -1.81
SPG11-211ENST00000558561 ITCHQ96J02 903 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 LURAP1Q96LR2 239 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 GPATCH1Q9BRR8 931 aaKnown RBP3.74□□□□□ -1.81
SPG11-211ENST00000558561 PIMREGQ9BSJ6 248 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 CCDC106Q9BWC9 280 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 KRTAP9-8Q9BYQ0 159 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 MTHFD2LQ9H903 347 aaPredicted RBP3.74□□□□□ -1.81
SPG11-211ENST00000558561 RNF122Q9H9V4 155 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 SAR1AQ9NR31 198 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 COQ3Q9NZJ6 369 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 C6orf203Q9P0P8 240 aaPredicted RBP3.74□□□□□ -1.81
SPG11-211ENST00000558561 B4GALT7Q9UBV7 327 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 SEC14L4Q9UDX3 406 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 OSGIN1Q9UJX0 560 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 ABCG2Q9UNQ0 655 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 USF3Q68DE3 2245 aa3.74□□□□□ -1.81
SPG11-211ENST00000558561 TEP1Q99973 2627 aaKnown RBP3.74□□□□□ -1.81
SPG11-211ENST00000558561 A0A096LPI6 279 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 TMED7-TICAM2A0A0A6YYA0 188 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 A0A1W2PP18 115 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 A0A1W2PR80 420 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 CXorf65A6NEN9 183 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 SLC22A20A6NK97 555 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 TTC36A6NLP5 189 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 DUXAA6NLW8 204 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 CCT8L1PA6NM43 557 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 HSPB2A8KAH6 182 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 EEF1E1-BLOC1S5C9J1V9 151 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 MCIDASD6RGH6 385 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 M0QX08 132 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 FXYD1O00168 92 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 SMAD9O15198 467 aaKnown RBP3.73□□□□□ -1.81
SPG11-211ENST00000558561 POLR3GO15318 223 aaPredicted RBP3.73□□□□□ -1.81
SPG11-211ENST00000558561 EEF1E1O43324 174 aaKnown RBP3.73□□□□□ -1.81
SPG11-211ENST00000558561 KIAA0513O60268 411 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 EIF4E2O60573 245 aaKnown RBP3.73□□□□□ -1.81
SPG11-211ENST00000558561 CTAG2O75638 210 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 PGM3O95394 542 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 TGDSO95455 350 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 ANP32DO95626 131 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 TK1P04183 234 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 UBL4AP11441 157 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 GPX2P18283 190 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 HTR2AP28223 471 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 CCKARP32238 428 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 MDH1P40925 334 aaKnown RBP3.73□□□□□ -1.81
SPG11-211ENST00000558561 MRPL19P49406 292 aaKnown RBP3.73□□□□□ -1.81
SPG11-211ENST00000558561 PSMD4P55036 377 aaKnown RBP3.73□□□□□ -1.81
SPG11-211ENST00000558561 DSTNP60981 165 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 EGR4Q05215 589 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 EPS8Q12929 822 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 RCAN2Q14206 197 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 NPTX1Q15818 432 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 HSPB2Q16082 182 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 GLYR1Q49A26 553 aaPredicted RBP3.73□□□□□ -1.81
SPG11-211ENST00000558561 MIDNQ504T8 468 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 SLC25A53Q5H9E4 307 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 LRIF1Q5T3J3 769 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 NANOGP8Q6NSW7 305 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 MTFR2Q6P444 385 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 AAGABQ6PD74 315 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 ENPP6Q6UWR7 440 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 LRRC74BQ6ZQY2 392 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 RINLQ6ZS11 566 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 RNF144BQ7Z419 303 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 P4HA3Q7Z4N8 544 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 MEX3DQ86XN8 651 aaKnown RBP3.73□□□□□ -1.81
SPG11-211ENST00000558561 PM20D2Q8IYS1 436 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 PAQR4Q8N4S7 273 aaPredicted RBP3.73□□□□□ -1.81
SPG11-211ENST00000558561 NANOGP1Q8N7R0 232 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 TMEM99Q8N816 258 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 ZIC4Q8N9L1 334 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 SMYD1Q8NB12 490 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 FAM71CQ8NEG0 241 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 GPR32P1Q8NGA4 272 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 OR10A6Q8NH74 314 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 LILRB1Q8NHL6 650 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms