RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 ARHGDIGQ99819 225 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 TMEM43Q9BTV4 400 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 RNF121Q9H920 327 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 B3GNT2Q9NY97 397 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 REV1Q9UBZ9 1251 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 DUSP13Q9UII6 198 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 FBXO9Q9UK97 447 aaPredicted RBP13.41□□□□□ -0.26
TPM1-211ENST00000558314 CUBNO60494 3623 aa13.41□□□□□ -0.26
TPM1-211ENST00000558314 FBN3Q75N90 2809 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 MXRA5Q9NR99 2828 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 A0A0G2JND7 137 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 A0A1W2PPW3 197 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 M0R233 179 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 CHP2O43745 196 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 FZD7O75084 574 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 UBL3O95164 117 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 MT-ATP6P00846 226 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 SRP14P37108 136 aaKnown RBP13.4□□□□□ -0.26
TPM1-211ENST00000558314 SEC24CP53992 1094 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 MSMPQ1L6U9 139 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 KRTAP24-1Q3LI83 254 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 SWT1Q5T5J6 900 aaKnown RBP13.4□□□□□ -0.26
TPM1-211ENST00000558314 WDR88Q6ZMY6 472 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 LRRC17Q8N6Y2 441 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 ICA1LQ8NDH6 482 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 OR4D11Q8NGI4 311 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 OR10A6Q8NH74 314 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 ADAMTS16Q8TE57 1224 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 MRPL24Q96A35 216 aaKnown RBP13.4□□□□□ -0.26
TPM1-211ENST00000558314 LRR1Q96L50 414 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 SH3GL3Q99963 347 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 EVA1AQ9H8M9 152 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 NANSQ9NR45 359 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 TRIM33Q9UPN9 1127 aa13.4□□□□□ -0.26
TPM1-211ENST00000558314 SYNGR3O43761 229 aa13.39□□□□□ -0.27
TPM1-211ENST00000558314 ZNF14P17017 642 aaPredicted RBP13.39□□□□□ -0.27
TPM1-211ENST00000558314 CD247P20963 164 aa13.39□□□□□ -0.27
TPM1-211ENST00000558314 PCBP3P57721 371 aaKnown RBP13.39□□□□□ -0.27
TPM1-211ENST00000558314 MYBPC1Q00872 1141 aa13.39□□□□□ -0.27
TPM1-211ENST00000558314 RBBP4Q09028 425 aa13.39□□□□□ -0.27
TPM1-211ENST00000558314 ZNF74Q16587 644 aa13.39□□□□□ -0.27
TPM1-211ENST00000558314 NANOGNBQ7Z5D8 188 aa13.39□□□□□ -0.27
TPM1-211ENST00000558314 PATL1Q86TB9 770 aaKnown RBP13.39□□□□□ -0.27
TPM1-211ENST00000558314 LRP11Q86VZ4 500 aa13.39□□□□□ -0.27
TPM1-211ENST00000558314 SKA3Q8IX90 412 aa13.39□□□□□ -0.27
TPM1-211ENST00000558314 ZNF786Q8N393 782 aa13.39□□□□□ -0.27
TPM1-211ENST00000558314 FGFBP3Q8TAT2 258 aa13.39□□□□□ -0.27
TPM1-211ENST00000558314 ZNF566Q969W8 418 aa13.39□□□□□ -0.27
TPM1-211ENST00000558314 GLTPQ9NZD2 209 aa13.39□□□□□ -0.27
TPM1-211ENST00000558314 TRAPPC13A5PLN9 417 aa13.38□□□□□ -0.27
TPM1-211ENST00000558314 MCIDASD6RGH6 385 aa13.38□□□□□ -0.27
TPM1-211ENST00000558314 BLOC1S5-TXNDC5H3BN57 136 aa13.38□□□□□ -0.27
TPM1-211ENST00000558314 FMO6PO60774 539 aa13.38□□□□□ -0.27
TPM1-211ENST00000558314 SHOX2O60902 331 aaPredicted RBP13.38□□□□□ -0.27
TPM1-211ENST00000558314 THY1P04216 161 aa13.38□□□□□ -0.27
TPM1-211ENST00000558314 FAM157BP0CG42 384 aa13.38□□□□□ -0.27
TPM1-211ENST00000558314 CCL2P13500 99 aa13.38□□□□□ -0.27
TPM1-211ENST00000558314 CLRN1P58418 232 aa13.38□□□□□ -0.27
TPM1-211ENST00000558314 RINLQ6ZS11 566 aa13.38□□□□□ -0.27
TPM1-211ENST00000558314 SLC22A24Q8N4F4 322 aa13.38□□□□□ -0.27
TPM1-211ENST00000558314 TAMM41Q96BW9 452 aa13.38□□□□□ -0.27
TPM1-211ENST00000558314 C19orf24Q9BVV8 132 aa13.38□□□□□ -0.27
TPM1-211ENST00000558314 LPAR2Q9HBW0 351 aa13.38□□□□□ -0.27
TPM1-211ENST00000558314 TAS2R5Q9NYW4 299 aa13.38□□□□□ -0.27
TPM1-211ENST00000558314 ZNF224Q9NZL3 707 aa13.38□□□□□ -0.27
TPM1-211ENST00000558314 MYEF2Q9P2K5 600 aaKnown RBP13.38□□□□□ -0.27
TPM1-211ENST00000558314 GMEB1Q9Y692 573 aa13.38□□□□□ -0.27
TPM1-211ENST00000558314 LILRA1O75019 489 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 FARS2O95363 451 aaKnown RBP13.37□□□□□ -0.27
TPM1-211ENST00000558314 BCL10O95999 233 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 F13BP05160 661 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 C8BP07358 591 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 IGFBP1P08833 259 aaPredicted RBP13.37□□□□□ -0.27
TPM1-211ENST00000558314 QDPRP09417 244 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 NAT2P11245 290 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 ZNF35P13682 527 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 TNFRSF1BP20333 461 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 GIFP27352 417 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 PCGF2P35227 344 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 GLRXP35754 106 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 GPR6P46095 362 aaPredicted RBP13.37□□□□□ -0.27
TPM1-211ENST00000558314 RPS23P62266 143 aaKnown RBP13.37□□□□□ -0.27
TPM1-211ENST00000558314 NKPD1Q17RQ9 610 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 INTS11Q5TA45 600 aaKnown RBP13.37□□□□□ -0.27
TPM1-211ENST00000558314 NHLRC1Q6VVB1 395 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 DEF8Q6ZN54 512 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 TSPYL5Q86VY4 417 aaPredicted RBP13.37□□□□□ -0.27
TPM1-211ENST00000558314 SLC30A8Q8IWU4 369 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 DPP10Q8N608 796 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 LINC01356Q8N9X3 169 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 SYT14Q8NB59 555 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 OR4K5Q8NGD3 323 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 OR6X1Q8NH79 312 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 TMEM54Q969K7 222 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 MAGEB18Q96M61 343 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 KAT8Q9H7Z6 458 aaKnown RBP13.37□□□□□ -0.27
TPM1-211ENST00000558314 CDH20Q9HBT6 801 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 SH3GLB1Q9Y371 365 aa13.37□□□□□ -0.27
TPM1-211ENST00000558314 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.36□□□□□ -0.275e-6■■■□□ 16.3
TPM1-211ENST00000558314 HMGB1P1B2RPK0 211 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms