RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 SSBP1Q04837 148 aaKnown RBP7.53□□□□□ -1.2
SPG11-209ENST00000558253 LTBQ06643 244 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 SNTB2Q13425 540 aaKnown RBP7.53□□□□□ -1.2
SPG11-209ENST00000558253 SF3B4Q15427 424 aaKnown RBP eCLIP7.53□□□□□ -1.2
SPG11-209ENST00000558253 NR0B2Q15466 257 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 TOMM34Q15785 309 aaPredicted RBP7.53□□□□□ -1.2
SPG11-209ENST00000558253 CARTPTQ16568 116 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 SLC25A35Q3KQZ1 300 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 SMUG1Q53HV7 270 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 TEX30Q5JUR7 227 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 ELFN2Q5R3F8 820 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 LIPNQ5VXI9 398 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 NKAIN2Q5VXU1 208 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 CD276Q5ZPR3 534 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 SLC18B1Q6NT16 456 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 DEGS2Q6QHC5 323 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 CBLN3Q6UW01 205 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 APOOLQ6UXV4 268 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 RPTNQ6XPR3 784 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 C9orf40Q8IXQ3 194 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 UBALD2Q8IYN6 164 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 SHISA5Q8N114 240 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 METTL27Q8N6F8 245 aaPredicted RBP7.53□□□□□ -1.2
SPG11-209ENST00000558253 OR56B4Q8NH76 319 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 MFSD8Q8NHS3 518 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 OTOSQ8NHW6 89 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 GPR119Q8TDV5 335 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 FCAMRQ8WWV6 532 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 TSLPQ969D9 159 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 TAAR8Q969N4 342 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 CLIP3Q96DZ5 547 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 KTI12Q96EK9 354 aaPredicted RBP7.53□□□□□ -1.2
SPG11-209ENST00000558253 CNTNAP3BQ96NU0 1288 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 MOGAT1Q96PD6 335 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 TSPAN32Q96QS1 320 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 OR14A2Q96R54 314 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 GAL3ST4Q96RP7 486 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 ABHD1Q96SE0 405 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 ELF4Q99607 663 aaPredicted RBP7.53□□□□□ -1.2
SPG11-209ENST00000558253 DHRS9Q9BPW9 319 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 POTEKPQ9BYX7 375 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 CNTNAP3Q9BZ76 1288 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 SLC7A5P2Q9GIP4 190 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 VN1R1Q9GZP7 353 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 TP63Q9H3D4 680 aaPredicted RBP7.53□□□□□ -1.2
SPG11-209ENST00000558253 RANBP3Q9H6Z4 567 aaPredicted RBP7.53□□□□□ -1.2
SPG11-209ENST00000558253 EMC7Q9NPA0 242 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 NOX4Q9NPH5 578 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 MCUBQ9NWR8 336 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 UCKL1Q9NWZ5 548 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 TAS2R10Q9NYW0 307 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 TAS2R5Q9NYW4 299 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 KLHL9Q9P2J3 617 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 MALT1Q9UDY8 824 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 NUFIP1Q9UHK0 495 aaKnown RBP7.53□□□□□ -1.2
SPG11-209ENST00000558253 ZNF346Q9UL40 294 aaKnown RBP7.53□□□□□ -1.2
SPG11-209ENST00000558253 MKL2Q9ULH7 1088 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 TMED7Q9Y3B3 224 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 PCDHGA9Q9Y5G4 932 aaKnown RBP7.53□□□□□ -1.2
SPG11-209ENST00000558253 SLCO1B1Q9Y6L6 691 aa7.53□□□□□ -1.2
SPG11-209ENST00000558253 ARHGEF17Q96PE2 2063 aaPredicted RBP7.52□□□□□ -1.21
SPG11-209ENST00000558253 IGLV3-32A0A0A0MS00 114 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 A0A1B0GVI7 797 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 TMEM72A0PK05 275 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 OR4C45A6NMZ5 311 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 A8MUA0 341 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 ETV2O00321 342 aaPredicted RBP7.52□□□□□ -1.21
SPG11-209ENST00000558253 PLPP3O14495 311 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 EEF1E1O43324 174 aaKnown RBP7.52□□□□□ -1.21
SPG11-209ENST00000558253 OIP5O43482 229 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 SUSD5O60279 629 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 NUDT14O95848 222 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 ABHD16AO95870 558 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 TCRBP04435 133 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 STOMP27105 288 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 DPP4P27487 766 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 FAUP35544 74 aaKnown RBP7.52□□□□□ -1.21
SPG11-209ENST00000558253 GZMKP49863 264 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 HCCSP53701 268 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 OR10A3P58181 314 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 RNF4P78317 190 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 IFITM2Q01629 132 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 CFHR1Q03591 330 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 ZP2Q05996 745 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 FAPQ12884 760 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 KCNAB1Q14722 419 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 SLC36A2Q495M3 483 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 MESTQ5EB52 335 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 FAM209AQ5JX71 171 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 FAM27D1Q5T7N8 215 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 C1orf140Q5VVS0 124 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 CREB3L2Q70SY1 520 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 BTN2A1Q7KYR7 527 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 FGD2Q7Z6J4 655 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 LUZP2Q86TE4 346 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 ZNF227Q86WZ6 799 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 ZNF679Q8IYX0 411 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 OR6V1Q8N148 313 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 SLC25A45Q8N413 288 aa7.52□□□□□ -1.21
SPG11-209ENST00000558253 FAM109AQ8N4B1 249 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms