RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 SLC22A23A1A5C7 686 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 TRAPPC13A5PLN9 417 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 ZNF503-AS2A6NEH8 195 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 C11orf98E9PRG8 122 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 RNF13O43567 381 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 PTHP01270 115 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 SERPINA5P05154 406 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 OR8G3PP0DMU2 310 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 ZNF14P17017 642 aaPredicted RBP11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 GIPRP48546 466 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 PCBP3P57721 371 aaKnown RBP11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 ZP4Q12836 540 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 ENTPD8Q5MY95 495 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 NHLRC1Q6VVB1 395 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 SLC35D2Q76EJ3 337 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 CDK20Q8IZL9 346 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 ZNF566Q969W8 418 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 SLC25A44Q96H78 314 aaPredicted RBP11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 MS4A3Q96HJ5 214 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 CGREF1Q99674 301 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 ARHGDIGQ99819 225 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 SH3GL1Q99961 368 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 MRGBPQ9NV56 204 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 GLTPQ9NZD2 209 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 TMEFF2Q9UIK5 374 aaPredicted RBP11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 ZNF229Q9UJW7 825 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 ZNF346Q9UL40 294 aaKnown RBP11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 MALRD1Q5VYJ5 2156 aa11.74□□□□□ -0.53
SNRPA1-204ENST00000558020 LRP5LA4QPB2 252 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 CPSF4LA6NMK7 179 aaKnown RBP11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 HMGB1P1B2RPK0 211 aaPredicted RBP11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 LRRN3E7EW58 273 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 M0R3H8 397 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 MGRN1O60291 552 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 CUBNO60494 3623 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 LILRA1O75019 489 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 CH25HO95992 272 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 CD247P20963 164 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 SRP14P37108 136 aaKnown RBP11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 RIN1Q13671 783 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 NFYCQ13952 458 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 CYLC2Q14093 348 aaPredicted RBP11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 ZNF74Q16587 644 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 CR1LQ2VPA4 569 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 METTL21CQ5VZV1 264 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 TMEM53Q6P2H8 277 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 HDDC2Q7Z4H3 204 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 PTOV1Q86YD1 416 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 SLC22A24Q8N4F4 322 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 OR6T1Q8NGN1 323 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 ADAMTS16Q8TE57 1224 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 TMEM54Q969K7 222 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 MAGEB18Q96M61 343 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 SNX18Q96RF0 628 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 SIKE1Q9BRV8 207 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 MRPL37Q9BZE1 423 aaKnown RBP11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 LRMDAQ9H2I8 198 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 C1orf198Q9H425 327 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 KAT8Q9H7Z6 458 aaKnown RBP11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 SLC7A8Q9UHI5 535 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 DUSP13Q9UII6 198 aa11.73□□□□□ -0.53
SNRPA1-204ENST00000558020 BCL10O95999 233 aa11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 UMPSP11172 480 aa11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 TMEM33P57088 247 aa11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 MTPNP58546 118 aa11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 PLP2Q04941 152 aa11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 NPTX1Q15818 432 aa11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 MOGQ16653 247 aa11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 SLC36A2Q495M3 483 aa11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 IL17RELQ6ZVW7 336 aa11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 SKA3Q8IX90 412 aa11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 OR1J2Q8NGS2 313 aa11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 VANGL1Q8TAA9 524 aaPredicted RBP11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 RDH5Q92781 318 aa11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 ZNF75AQ96N20 296 aa11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 WFDC6Q9BQY6 131 aa11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 TPK1Q9H3S4 243 aa11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 RNF121Q9H920 327 aa11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 TAS2R5Q9NYW4 299 aa11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 SLC7A7Q9UM01 511 aa11.72□□□□□ -0.53
SNRPA1-204ENST00000558020 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.72□□□□□ -0.533e-11■■□□□ 12.1
SNRPA1-204ENST00000558020 A0A1W2PPW3 197 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 A0A1W2PRG6 482 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 B4DSR2 109 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 BLOC1S5-TXNDC5H3BN57 136 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 DHHO43323 396 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 IFNA14P01570 189 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 IGHG1P01857 330 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 OPN1SWP03999 348 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 PCGF2P35227 344 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 RAD52P43351 418 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 ZNF84P51523 738 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 CLRN1P58418 232 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 MRPS11P82912 194 aaKnown RBP11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 SCGB2A2Q13296 93 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 RAB39AQ14964 217 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 FXNQ16595 210 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 KRTAP24-1Q3LI83 254 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 MMEL1Q495T6 779 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 NRN1LQ496H8 165 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms