RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 GALNT8Q9NY28 637 aa18.78■□□□□ 0.6
CASC4-204ENST00000557945 RRP15Q9Y3B9 282 aaKnown RBP18.78■□□□□ 0.6
CASC4-204ENST00000557945 FASNP49327 2511 aaKnown RBP18.77■□□□□ 0.6
CASC4-204ENST00000557945 SOCS2O14508 198 aa18.77■□□□□ 0.6
CASC4-204ENST00000557945 XKRYO14609 159 aa18.77■□□□□ 0.6
CASC4-204ENST00000557945 ARHGEF9O43307 516 aa18.77■□□□□ 0.6
CASC4-204ENST00000557945 CNOT4O95628 575 aaKnown RBP18.77■□□□□ 0.6
CASC4-204ENST00000557945 SDHAP31040 664 aa18.77■□□□□ 0.6
CASC4-204ENST00000557945 PPP2R2BQ00005 443 aa18.77■□□□□ 0.6
CASC4-204ENST00000557945 KRR1Q13601 381 aaKnown RBP18.77■□□□□ 0.6
CASC4-204ENST00000557945 DAG1Q14118 895 aa18.77■□□□□ 0.6
CASC4-204ENST00000557945 FBXL19-AS1Q494R0 122 aa18.77■□□□□ 0.6
CASC4-204ENST00000557945 ZBTB49Q6ZSB9 765 aa18.77■□□□□ 0.6
CASC4-204ENST00000557945 FAM122BQ7Z309 247 aa18.77■□□□□ 0.6
CASC4-204ENST00000557945 ABHD12BQ7Z5M8 362 aaPredicted RBP18.77■□□□□ 0.6
CASC4-204ENST00000557945 HDAC2Q92769 488 aaKnown RBP18.77■□□□□ 0.6
CASC4-204ENST00000557945 LRR1Q96L50 414 aa18.77■□□□□ 0.6
CASC4-204ENST00000557945 LINC00470Q9BZP3 86 aa18.77■□□□□ 0.6
CASC4-204ENST00000557945 ELOVL5Q9NYP7 299 aa18.77■□□□□ 0.6
CASC4-204ENST00000557945 ZNF587BE7ETH6 402 aa18.76■□□□□ 0.59
CASC4-204ENST00000557945 PGA4P0DJD7 388 aa18.76■□□□□ 0.59
CASC4-204ENST00000557945 PGA3P0DJD8 388 aa18.76■□□□□ 0.59
CASC4-204ENST00000557945 APEHP13798 732 aaKnown RBP18.76■□□□□ 0.59
CASC4-204ENST00000557945 CD79BP40259 229 aa18.76■□□□□ 0.59
CASC4-204ENST00000557945 FAM27E3Q08E93 113 aa18.76■□□□□ 0.59
CASC4-204ENST00000557945 PHYHD1Q5SRE7 291 aa18.76■□□□□ 0.59
CASC4-204ENST00000557945 SLC35F1Q5T1Q4 408 aa18.76■□□□□ 0.59
CASC4-204ENST00000557945 C9orf135Q5VTT2 229 aa18.76■□□□□ 0.59
CASC4-204ENST00000557945 CXorf67Q86X51 503 aaPredicted RBP18.76■□□□□ 0.59
CASC4-204ENST00000557945 GABRG1Q8N1C3 465 aa18.76■□□□□ 0.59
CASC4-204ENST00000557945 PARP8Q8N3A8 854 aa18.76■□□□□ 0.59
CASC4-204ENST00000557945 NOXO1Q8NFA2 376 aa18.76■□□□□ 0.59
CASC4-204ENST00000557945 OR2T33Q8NG76 320 aa18.76■□□□□ 0.59
CASC4-204ENST00000557945 OR4Q3Q8NH05 313 aa18.76■□□□□ 0.59
CASC4-204ENST00000557945 ULBP2Q9BZM5 246 aa18.76■□□□□ 0.59
CASC4-204ENST00000557945 GLTPQ9NZD2 209 aa18.76■□□□□ 0.59
CASC4-204ENST00000557945 NKX1-2Q9UD57 310 aaPredicted RBP18.76■□□□□ 0.59
CASC4-204ENST00000557945 MALT1Q9UDY8 824 aa18.76■□□□□ 0.59
CASC4-204ENST00000557945 TMEFF2Q9UIK5 374 aaPredicted RBP18.76■□□□□ 0.59
CASC4-204ENST00000557945 ORC6Q9Y5N6 252 aa18.76■□□□□ 0.59
CASC4-204ENST00000557945 DOPEY1Q5JWR5 2465 aa18.75■□□□□ 0.59
CASC4-204ENST00000557945 BHLHE40O14503 412 aa18.75■□□□□ 0.59
CASC4-204ENST00000557945 IMPA2O14732 288 aa18.75■□□□□ 0.59
CASC4-204ENST00000557945 ARPC3O15145 178 aa18.75■□□□□ 0.59
CASC4-204ENST00000557945 IDH3BO43837 385 aa18.75■□□□□ 0.59
CASC4-204ENST00000557945 ALPLP05186 524 aa18.75■□□□□ 0.59
CASC4-204ENST00000557945 ROR2Q01974 943 aaKnown RBP18.75■□□□□ 0.59
CASC4-204ENST00000557945 CD47Q08722 323 aa18.75■□□□□ 0.59
CASC4-204ENST00000557945 GINS1Q14691 196 aa18.75■□□□□ 0.59
CASC4-204ENST00000557945 LRRC36Q1X8D7 754 aa18.75■□□□□ 0.59
CASC4-204ENST00000557945 MESTQ5EB52 335 aa18.75■□□□□ 0.59
CASC4-204ENST00000557945 LPCAT4Q643R3 524 aa18.75■□□□□ 0.59
CASC4-204ENST00000557945 IQCF1Q8N6M8 205 aa18.75■□□□□ 0.59
CASC4-204ENST00000557945 TMEM54Q969K7 222 aa18.75■□□□□ 0.59
CASC4-204ENST00000557945 RNPEPL1Q9HAU8 725 aa18.75■□□□□ 0.59
CASC4-204ENST00000557945 GPR35Q9HC97 309 aa18.75■□□□□ 0.59
CASC4-204ENST00000557945 USE1Q9NZ43 259 aa18.75■□□□□ 0.59
CASC4-204ENST00000557945 FOXD3Q9UJU5 478 aaPredicted RBP18.75■□□□□ 0.59
CASC4-204ENST00000557945 BAIAP2Q9UQB8 552 aa18.75■□□□□ 0.59
CASC4-204ENST00000557945 CACNA1CQ13936 2221 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 A1L4Q6 167 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 CENPBD1B2RD01 187 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 H7C1C5 153 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 LYZL6O75951 148 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 TXNDC12O95881 172 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 CDH2P19022 906 aaPredicted RBP18.74■□□□□ 0.59
CASC4-204ENST00000557945 IGHV1-2P23083 117 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 GRNP28799 593 aaKnown RBP18.74■□□□□ 0.59
CASC4-204ENST00000557945 ALDH3A2P51648 485 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 CRISP1P54107 249 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 LCN6P62502 163 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 ESRRGP62508 458 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 MYBPC1Q00872 1141 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 SLC34A1Q06495 639 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 TFF3Q07654 80 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 P2RY6Q15077 328 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 TSC22D1Q15714 1073 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 PGGHGQ32M88 737 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 SLC27A4Q6P1M0 643 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 LINGO2Q7L985 606 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 JAZF1Q86VZ6 243 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 OR4K13Q8NH42 304 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 KCNK17Q96T54 332 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 SLC29A1Q99808 456 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 ALG12Q9BV10 488 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 MRPL13Q9BYD1 178 aaKnown RBP18.74■□□□□ 0.59
CASC4-204ENST00000557945 RIBC2Q9H4K1 309 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 CRLF2Q9HC73 371 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 ENOPH1Q9UHY7 261 aa18.74■□□□□ 0.59
CASC4-204ENST00000557945 LRRK2Q5S007 2527 aa18.73■□□□□ 0.59
CASC4-204ENST00000557945 CIB4A0PJX0 185 aa18.73■□□□□ 0.59
CASC4-204ENST00000557945 MGRN1O60291 552 aa18.73■□□□□ 0.59
CASC4-204ENST00000557945 QDPRP09417 244 aa18.73■□□□□ 0.59
CASC4-204ENST00000557945 HIST1H1CP16403 213 aaKnown RBP18.73■□□□□ 0.59
CASC4-204ENST00000557945 MPGP29372 298 aa18.73■□□□□ 0.59
CASC4-204ENST00000557945 FOXG1P55316 489 aaPredicted RBP18.73■□□□□ 0.59
CASC4-204ENST00000557945 ITGADQ13349 1161 aa18.73■□□□□ 0.59
CASC4-204ENST00000557945 SFRP5Q5T4F7 317 aa18.73■□□□□ 0.59
CASC4-204ENST00000557945 STAC2Q6ZMT1 411 aa18.73■□□□□ 0.59
CASC4-204ENST00000557945 ADCK1Q86TW2 530 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms