RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 SLC7A7Q9UM01 511 aa12.64□□□□□ -0.39
SHMT2-235ENST00000557740 A0A0G2JND7 137 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 M0R233 179 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 RNF13O43567 381 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 TGFAP01135 160 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 HIST1H2ABP04908 130 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 UMPSP11172 480 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 ZNF14P17017 642 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-235ENST00000557740 GIFP27352 417 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 CHN2P52757 468 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 FAM120AOSQ5T036 256 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 NHLRC1Q6VVB1 395 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 LINC00114Q6XXX2 140 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 WDR88Q6ZMY6 472 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 IL17RELQ6ZVW7 336 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 HIST3H2AQ7L7L0 130 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 HDXQ7Z353 690 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 NANOGNBQ7Z5D8 188 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 ZCCHC24Q8N2G6 241 aaKnown RBP12.63□□□□□ -0.39
SHMT2-235ENST00000557740 OR10A6Q8NH74 314 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 OR6X1Q8NH79 312 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 RASSF5Q8WWW0 418 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 HIST1H2ACQ93077 130 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 MRPL24Q96A35 216 aaKnown RBP12.63□□□□□ -0.39
SHMT2-235ENST00000557740 TAMM41Q96BW9 452 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 MPP4Q96JB8 637 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 SLC19A3Q9BZV2 496 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 TPK1Q9H3S4 243 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 GLTPQ9NZD2 209 aa12.63□□□□□ -0.39
SHMT2-235ENST00000557740 TMEM129A0AVI4 362 aa12.62□□□□□ -0.39
SHMT2-235ENST00000557740 SYNGR3O43761 229 aa12.62□□□□□ -0.39
SHMT2-235ENST00000557740 EDF1O60869 148 aaKnown RBP12.62□□□□□ -0.39
SHMT2-235ENST00000557740 RAB1AP62820 205 aa12.62□□□□□ -0.39
SHMT2-235ENST00000557740 MELKQ14680 651 aa12.62□□□□□ -0.39
SHMT2-235ENST00000557740 PIWIL3Q7Z3Z3 882 aaKnown RBP12.62□□□□□ -0.39
SHMT2-235ENST00000557740 RBM45Q8IUH3 476 aaKnown RBP12.62□□□□□ -0.39
SHMT2-235ENST00000557740 ZNF786Q8N393 782 aa12.62□□□□□ -0.39
SHMT2-235ENST00000557740 UBASH3BQ8TF42 649 aa12.62□□□□□ -0.39
SHMT2-235ENST00000557740 TMEM54Q969K7 222 aa12.62□□□□□ -0.39
SHMT2-235ENST00000557740 ZNF566Q969W8 418 aa12.62□□□□□ -0.39
SHMT2-235ENST00000557740 SYT3Q9BQG1 590 aa12.62□□□□□ -0.39
SHMT2-235ENST00000557740 MRPL37Q9BZE1 423 aaKnown RBP12.62□□□□□ -0.39
SHMT2-235ENST00000557740 ARGLU1Q9NWB6 273 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-235ENST00000557740 ZNF224Q9NZL3 707 aa12.62□□□□□ -0.39
SHMT2-235ENST00000557740 ZNF229Q9UJW7 825 aa12.62□□□□□ -0.39
SHMT2-235ENST00000557740 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.61□□□□□ -0.393e-7■■■■■ 47.5
SHMT2-235ENST00000557740 LRP5LA4QPB2 252 aa12.61□□□□□ -0.39
SHMT2-235ENST00000557740 MCIDASD6RGH6 385 aa12.61□□□□□ -0.39
SHMT2-235ENST00000557740 LYPD3O95274 346 aa12.61□□□□□ -0.39
SHMT2-235ENST00000557740 FARS2O95363 451 aaKnown RBP12.61□□□□□ -0.39
SHMT2-235ENST00000557740 THY1P04216 161 aa12.61□□□□□ -0.39
SHMT2-235ENST00000557740 OR8G3PP0DMU2 310 aa12.61□□□□□ -0.39
SHMT2-235ENST00000557740 ZNF35P13682 527 aa12.61□□□□□ -0.39
SHMT2-235ENST00000557740 APEX1P27695 318 aaKnown RBP12.61□□□□□ -0.39
SHMT2-235ENST00000557740 EVX1P49640 407 aa12.61□□□□□ -0.39
SHMT2-235ENST00000557740 ZP4Q12836 540 aa12.61□□□□□ -0.39
SHMT2-235ENST00000557740 CYLC2Q14093 348 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-235ENST00000557740 RAB39AQ14964 217 aa12.61□□□□□ -0.39
SHMT2-235ENST00000557740 VMACQ2NL98 169 aa12.61□□□□□ -0.39
SHMT2-235ENST00000557740 OR4D11Q8NGI4 311 aa12.61□□□□□ -0.39
SHMT2-235ENST00000557740 HPS1Q92902 700 aa12.61□□□□□ -0.39
SHMT2-235ENST00000557740 SLC25A44Q96H78 314 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-235ENST00000557740 ZNF75AQ96N20 296 aa12.61□□□□□ -0.39
SHMT2-235ENST00000557740 SNX18Q96RF0 628 aa12.61□□□□□ -0.39
SHMT2-235ENST00000557740 PCDHAC1Q9H158 963 aa12.61□□□□□ -0.39
SHMT2-235ENST00000557740 VIPAS39Q9H9C1 493 aa12.61□□□□□ -0.39
SHMT2-235ENST00000557740 TAS2R5Q9NYW4 299 aa12.61□□□□□ -0.39
SHMT2-235ENST00000557740 REV1Q9UBZ9 1251 aa12.61□□□□□ -0.39
SHMT2-235ENST00000557740 MALRD1Q5VYJ5 2156 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 A0A1W2PPW3 197 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 BCL10O95999 233 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 IGHG1P01857 330 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 TACSTD2P09758 323 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 THBS2P35442 1172 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 GLRXP35754 106 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 ALDH3B1P43353 468 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 CLRN1P58418 232 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 MSMPQ1L6U9 139 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 CR1LQ2VPA4 569 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 METTL21CQ5VZV1 264 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 REP15Q6BDI9 236 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 DEF8Q6ZN54 512 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 HDDC2Q7Z4H3 204 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 SKA3Q8IX90 412 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 SLC22A24Q8N4F4 322 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 LRRC17Q8N6Y2 441 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 SH3GL1Q99961 368 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 ZNF426Q9BUY5 554 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 MS4A5Q9H3V2 200 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 RNF121Q9H920 327 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 TMEM38BQ9NVV0 291 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 SLC7A8Q9UHI5 535 aa12.6□□□□□ -0.39
SHMT2-235ENST00000557740 A0A1W2PRG6 482 aa12.59□□□□□ -0.39
SHMT2-235ENST00000557740 BLOC1S5-TXNDC5H3BN57 136 aa12.59□□□□□ -0.39
SHMT2-235ENST00000557740 DHHO43323 396 aa12.59□□□□□ -0.39
SHMT2-235ENST00000557740 LILRA1O75019 489 aa12.59□□□□□ -0.39
SHMT2-235ENST00000557740 SERPINA5P05154 406 aa12.59□□□□□ -0.39
SHMT2-235ENST00000557740 IGFBP1P08833 259 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-235ENST00000557740 ASAH2BP0C7U1 165 aa12.59□□□□□ -0.39
SHMT2-235ENST00000557740 PATE4P0C8F1 98 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms