RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 SLC30A8Q8IWU4 369 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 GPR32P1Q8NGA4 272 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 OR6T1Q8NGN1 323 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 OR6X1Q8NH79 312 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 TSPEARQ8WU66 669 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 STON2Q8WXE9 905 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 TMEM54Q969K7 222 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 TAS2R5Q9NYW4 299 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 GLTPQ9NZD2 209 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 FBXL3Q9UKT7 428 aa13.69□□□□□ -0.22
TUBB3-213ENST00000557262 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.69□□□□□ -0.222e-8■■□□□ 12
TUBB3-213ENST00000557262 CPSF4LA6NMK7 179 aaKnown RBP13.68□□□□□ -0.22
TUBB3-213ENST00000557262 M0R233 179 aa13.68□□□□□ -0.22
TUBB3-213ENST00000557262 ANGPT2O15123 496 aa13.68□□□□□ -0.22
TUBB3-213ENST00000557262 CH25HO95992 272 aa13.68□□□□□ -0.22
TUBB3-213ENST00000557262 OPN1SWP03999 348 aa13.68□□□□□ -0.22
TUBB3-213ENST00000557262 GALK2Q01415 458 aa13.68□□□□□ -0.22
TUBB3-213ENST00000557262 SELPLGQ14242 412 aa13.68□□□□□ -0.22
TUBB3-213ENST00000557262 RAB39AQ14964 217 aa13.68□□□□□ -0.22
TUBB3-213ENST00000557262 ZNF74Q16587 644 aa13.68□□□□□ -0.22
TUBB3-213ENST00000557262 TTMPQ5BVD1 217 aa13.68□□□□□ -0.22
TUBB3-213ENST00000557262 GKAP1Q5VSY0 366 aaPredicted RBP13.68□□□□□ -0.22
TUBB3-213ENST00000557262 WDR88Q6ZMY6 472 aa13.68□□□□□ -0.22
TUBB3-213ENST00000557262 PATL1Q86TB9 770 aaKnown RBP13.68□□□□□ -0.22
TUBB3-213ENST00000557262 SKA3Q8IX90 412 aa13.68□□□□□ -0.22
TUBB3-213ENST00000557262 LINC01356Q8N9X3 169 aa13.68□□□□□ -0.22
TUBB3-213ENST00000557262 ADAMTS16Q8TE57 1224 aa13.68□□□□□ -0.22
TUBB3-213ENST00000557262 TPK1Q9H3S4 243 aa13.68□□□□□ -0.22
TUBB3-213ENST00000557262 KAT8Q9H7Z6 458 aaKnown RBP13.68□□□□□ -0.22
TUBB3-213ENST00000557262 NANSQ9NR45 359 aa13.68□□□□□ -0.22
TUBB3-213ENST00000557262 INTS9Q9NV88 658 aaKnown RBP13.68□□□□□ -0.22
TUBB3-213ENST00000557262 TRAPPC13A5PLN9 417 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 LYNX1G3V0Z9 82 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 RNF13O43567 381 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 ENTPD5O75356 428 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 LYPD3O95274 346 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 THY1P04216 161 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 HIST1H2ABP04908 130 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 SERPINA5P05154 406 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 OR8G3PP0DMU2 310 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 LYNX1P0DP58 116 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 APEX1P27695 318 aaKnown RBP13.67□□□□□ -0.22
TUBB3-213ENST00000557262 IL2RGP31785 369 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 LSP1P33241 339 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 MTPNP58546 118 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 RPS23P62266 143 aaKnown RBP13.67□□□□□ -0.22
TUBB3-213ENST00000557262 NFYCQ13952 458 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 FXNQ16595 210 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 LRFN4Q6PJG9 635 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 HIST3H2AQ7L7L0 130 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 RETREG3Q86VR2 466 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 RBM45Q8IUH3 476 aaKnown RBP13.67□□□□□ -0.22
TUBB3-213ENST00000557262 SLC22A24Q8N4F4 322 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 OR4D11Q8NGI4 311 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 VANGL1Q8TAA9 524 aaPredicted RBP13.67□□□□□ -0.22
TUBB3-213ENST00000557262 SLC26A7Q8TE54 656 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 HIST1H2ACQ93077 130 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 ZNF566Q969W8 418 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 THOC1Q96FV9 657 aaKnown RBP13.67□□□□□ -0.22
TUBB3-213ENST00000557262 SLC25A44Q96H78 314 aaPredicted RBP13.67□□□□□ -0.22
TUBB3-213ENST00000557262 C1orf159Q96HA4 380 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 MPP4Q96JB8 637 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 SNX18Q96RF0 628 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 SLC19A3Q9BZV2 496 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 TMEFF2Q9UIK5 374 aaPredicted RBP13.67□□□□□ -0.22
TUBB3-213ENST00000557262 SLC7A7Q9UM01 511 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 TRIM33Q9UPN9 1127 aa13.67□□□□□ -0.22
TUBB3-213ENST00000557262 PATE4P0C8F1 98 aa13.66□□□□□ -0.22
TUBB3-213ENST00000557262 TCN1P20061 433 aaPredicted RBP13.66□□□□□ -0.22
TUBB3-213ENST00000557262 CD247P20963 164 aa13.66□□□□□ -0.22
TUBB3-213ENST00000557262 SEC24CP53992 1094 aa13.66□□□□□ -0.22
TUBB3-213ENST00000557262 TRIP10Q15642 601 aa13.66□□□□□ -0.22
TUBB3-213ENST00000557262 INTS11Q5TA45 600 aaKnown RBP13.66□□□□□ -0.22
TUBB3-213ENST00000557262 LIPNQ5VXI9 398 aa13.66□□□□□ -0.22
TUBB3-213ENST00000557262 REP15Q6BDI9 236 aa13.66□□□□□ -0.22
TUBB3-213ENST00000557262 LRP11Q86VZ4 500 aa13.66□□□□□ -0.22
TUBB3-213ENST00000557262 LRRC17Q8N6Y2 441 aa13.66□□□□□ -0.22
TUBB3-213ENST00000557262 FGFBP3Q8TAT2 258 aa13.66□□□□□ -0.22
TUBB3-213ENST00000557262 MAGEB18Q96M61 343 aa13.66□□□□□ -0.22
TUBB3-213ENST00000557262 SYT3Q9BQG1 590 aa13.66□□□□□ -0.22
TUBB3-213ENST00000557262 C19orf24Q9BVV8 132 aa13.66□□□□□ -0.22
TUBB3-213ENST00000557262 ZNF385DQ9H6B1 395 aa13.66□□□□□ -0.22
TUBB3-213ENST00000557262 SLC7A8Q9UHI5 535 aa13.66□□□□□ -0.22
TUBB3-213ENST00000557262 ZNF229Q9UJW7 825 aa13.66□□□□□ -0.22
TUBB3-213ENST00000557262 DHHO43323 396 aa13.65□□□□□ -0.22
TUBB3-213ENST00000557262 FARS2O95363 451 aaKnown RBP13.65□□□□□ -0.22
TUBB3-213ENST00000557262 BCL10O95999 233 aa13.65□□□□□ -0.22
TUBB3-213ENST00000557262 VIMP08670 466 aaKnown RBP13.65□□□□□ -0.22
TUBB3-213ENST00000557262 ASAH2BP0C7U1 165 aa13.65□□□□□ -0.22
TUBB3-213ENST00000557262 COL8A2P25067 703 aa13.65□□□□□ -0.22
TUBB3-213ENST00000557262 PCGF2P35227 344 aa13.65□□□□□ -0.22
TUBB3-213ENST00000557262 ALDH3B1P43353 468 aa13.65□□□□□ -0.22
TUBB3-213ENST00000557262 CDH15P55291 814 aa13.65□□□□□ -0.22
TUBB3-213ENST00000557262 ELFN2Q5R3F8 820 aa13.65□□□□□ -0.22
TUBB3-213ENST00000557262 ZNF584Q8IVC4 421 aa13.65□□□□□ -0.22
TUBB3-213ENST00000557262 OR10A6Q8NH74 314 aa13.65□□□□□ -0.22
TUBB3-213ENST00000557262 RASSF5Q8WWW0 418 aa13.65□□□□□ -0.22
TUBB3-213ENST00000557262 RDH5Q92781 318 aa13.65□□□□□ -0.22
TUBB3-213ENST00000557262 TAMM41Q96BW9 452 aa13.65□□□□□ -0.22
TUBB3-213ENST00000557262 ZNF426Q9BUY5 554 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms