RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 FAM199XQ6PEV8 388 aaPredicted RBP13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 LSMEM1Q8N8F7 131 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 ANKRD10Q9NXR5 420 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 SLCO1C1Q9NYB5 712 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 EPHA6Q9UF33 1036 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 F10P00742 488 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 DDOSTP39656 456 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 IFITM2Q01629 132 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 CDK10Q15131 360 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 C4orf46Q504U0 113 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 PAPD4Q6PIY7 484 aaKnown RBP13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 NDUFAF7Q7L592 441 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 EID2Q8N6I1 236 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 ZNF615Q8N8J6 731 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 GPR148Q8TDV2 347 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 ADAMTS18Q8TE60 1221 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 SEC22CQ9BRL7 303 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 DHDHQ9UQ10 334 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 EMC9Q9Y3B6 208 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 NOX1Q9Y5S8 564 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 PCDH15Q96QU1 1955 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 FAM47E-STBD1D6RA91 191 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 SLC43A1O75387 559 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 DNASE1P24855 282 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 OR14A16Q8NHC5 309 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 PGLYRP3Q96LB9 341 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 SCRG1O75711 98 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 ERP29P30040 261 aaKnown RBP13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 PTH2RP49190 550 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 FUT7Q11130 342 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 CBFBQ13951 182 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 NDUFA5Q16718 116 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 WDR45BQ5MNZ6 344 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 ZNF227Q86WZ6 799 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 SPACA5Q96QH8 159 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 DIABLOQ9NR28 239 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 PPP4R1LQ9P1A2 415 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 KLHL9Q9P2J3 617 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 UBL3O95164 117 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 LYPD3O95274 346 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 DCTDP32321 178 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 CAMK2DQ13557 499 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 NKPD1Q17RQ9 610 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 LRRC37A5PQ49AS3 106 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 Q7L0L9 218 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 ZNF485Q8NCK3 441 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 NPRL2Q8WTW4 380 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 KIAA1143Q96AT1 154 aaPredicted RBP13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 TSPAN32Q96QS1 320 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 DEFB126Q9BYW3 111 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 ITGB1BP2Q9UKP3 347 aa13.91□□□□□ -0.18
TMEM55B-207ENST00000557041 A0A1B0GX78 115 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 A0A1W2PNR3 127 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 IFITM5A6NNB3 132 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 TEX46H3BTG2 121 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 RBBP9O75884 186 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 TMIGD3P0DMS9 266 aaPredicted RBP13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 ANXA3P12429 323 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 IFNGR1P15260 489 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 CDK2P24941 298 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 LTBQ06643 244 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 Q499Y3 187 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 TRIM63Q969Q1 353 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 ARL5BQ96KC2 179 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 OR5B2Q96R09 309 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 AMELYQ99218 206 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 GPER1Q99527 375 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 GDF15Q99988 308 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 METTL17Q9H7H0 456 aaPredicted RBP13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 COQ3Q9NZJ6 369 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 GDF9O60383 454 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 IL33O95760 270 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 HLA-DOBP13765 273 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 AGFG1P52594 562 aaKnown RBP13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 RIDAP52758 137 aaKnown RBP13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 TSPAN5P62079 268 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 INPP5JQ15735 1006 aaPredicted RBP13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 KLHL26Q53HC5 615 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 C1orf140Q5VVS0 124 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 SLC18B1Q6NT16 456 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 GUSBP11Q6P575 273 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 FGF11Q92914 225 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 KCTD12Q96CX2 325 aaKnown RBP13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 SHDQ96IW2 340 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 ZNF649Q9BS31 505 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 WWTR1Q9GZV5 400 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 MGAT4CQ9UBM8 478 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 RARRES3Q9UL19 164 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 NPFFR2Q9Y5X5 522 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 TMEM14AQ9Y6G1 99 aa13.9□□□□□ -0.18
TMEM55B-207ENST00000557041 ALOX12BO75342 701 aa13.89□□□□□ -0.19
TMEM55B-207ENST00000557041 TRIM3O75382 744 aaPredicted RBP13.89□□□□□ -0.19
TMEM55B-207ENST00000557041 ANXA7P20073 488 aaKnown RBP13.89□□□□□ -0.19
TMEM55B-207ENST00000557041 ZNF41P51814 821 aaPredicted RBP13.89□□□□□ -0.19
TMEM55B-207ENST00000557041 LIMK1P53667 647 aa13.89□□□□□ -0.19
TMEM55B-207ENST00000557041 EFR3AQ14156 821 aa13.89□□□□□ -0.19
TMEM55B-207ENST00000557041 EBPQ15125 230 aaKnown RBP13.89□□□□□ -0.19
TMEM55B-207ENST00000557041 NKAIN1Q4KMZ8 207 aa13.89□□□□□ -0.19
TMEM55B-207ENST00000557041 MESTQ5EB52 335 aa13.89□□□□□ -0.19
TMEM55B-207ENST00000557041 KLHL24Q6TFL4 600 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms