RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 TMEM64Q6YI46 380 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 FAM92BQ6ZTR7 304 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 ABHD13Q7L211 337 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 LINGO2Q7L985 606 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 PARGQ86W56 976 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 PAQR7Q86WK9 346 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 CARM1Q86X55 608 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 GKN2Q86XP6 184 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 PTOV1Q86YD1 416 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 KLBQ86Z14 1044 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 CHERPQ8IWX8 916 aaKnown RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 CLECL1Q8IZS7 167 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 SPEM1Q8N4L4 309 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 C2orf73Q8N5S3 287 aaPredicted RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 TMEM217Q8N7C4 229 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 C7orf57Q8NEG2 295 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 OR4E2Q8NGC2 313 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 OR2T29Q8NH02 315 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 MAGEE2Q8TD90 523 aaPredicted RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 CHPT1Q8WUD6 406 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 FAR1Q8WVX9 515 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 NR4A3Q92570 626 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 TMBIM1Q969X1 311 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 TSACCQ96A04 125 aaPredicted RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 RERGQ96A58 199 aaPredicted RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 KIAA1143Q96AT1 154 aaPredicted RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 HAVCR1Q96D42 359 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 MS4A6EQ96DS6 147 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 NEURL3Q96EH8 262 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 RMND5BQ96G75 393 aaPredicted RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 PDXPQ96GD0 296 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 CNBD2Q96M20 576 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 RAB40CQ96S21 281 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 SLC29A1Q99808 456 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 TMEM43Q9BTV4 400 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 DOHHQ9BU89 302 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 GPR174Q9BXC1 333 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 IKZF5Q9H5V7 419 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 TRIM45Q9H8W5 580 aaPredicted RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 REEP1Q9H902 201 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 UCK1Q9HA47 277 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 CLK4Q9HAZ1 481 aaKnown RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 C3orf14Q9HBI5 128 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 VCX3AQ9NNX9 186 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 TREM1Q9NP99 234 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 CALML5Q9NZT1 146 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 TAAR2Q9P1P5 351 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 RHCGQ9UBD6 479 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 ERVK-11Q9UQG0 969 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 FAM32AQ9Y421 112 aaKnown RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 SLCO1B1Q9Y6L6 691 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 HSPE1-MOB4S4R3N1 261 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 BRWD1Q9NSI6 2320 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 IGHV1OR15-9A0A0B4J2B8 117 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 IGKV1-8A0A0C4DH67 115 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 DPPA5A6NC42 116 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 LILRA5A6NI73 299 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 PLPP2O43688 288 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 SSX4O60224 188 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 NME2P1O60361 137 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 SDC3O75056 442 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 LRP4O75096 1905 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 SERPINB7O75635 380 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 H6PDO95479 791 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 NTN1O95631 604 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 TGM6O95932 706 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 ALPLP05186 524 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 IGHV4-34P06331 123 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 OR2T7P0C7T2 308 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 SAGP10523 405 aaPredicted RBP4.59□□□□□ -1.67
SRP54-211ENST00000556445 ZNF44P15621 663 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 UGT2B7P16662 529 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 ATP5A1P25705 553 aaKnown RBP4.59□□□□□ -1.67
SRP54-211ENST00000556445 UCP1P25874 307 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 AK4P27144 223 aaPredicted RBP4.59□□□□□ -1.67
SRP54-211ENST00000556445 PRDX2P32119 198 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 IFNA8P32881 189 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 CCT3P49368 545 aaKnown RBP4.59□□□□□ -1.67
SRP54-211ENST00000556445 PLA2G16P53816 162 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 ESRRGP62508 458 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 UBE2IP63279 158 aaKnown RBP4.59□□□□□ -1.67
SRP54-211ENST00000556445 CDK6Q00534 326 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 BNC1Q01954 994 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 SLAMF1Q13291 335 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 NDUFA9Q16795 377 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 CYBRD1Q53TN4 286 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 RBM48Q5RL73 367 aaKnown RBP4.59□□□□□ -1.67
SRP54-211ENST00000556445 C6orf52Q5T4I8 152 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 NDUFAF5Q5TEU4 345 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 ADNP2Q6IQ32 1131 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 ANKRD26P1Q6NSI1 321 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 CBLN3Q6UW01 205 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 SPESP1Q6UW49 350 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 SIGLEC15Q6ZMC9 328 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 ZNF517Q6ZMY9 492 aaPredicted RBP4.59□□□□□ -1.67
SRP54-211ENST00000556445 TRIM73Q86UV7 250 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 CYP4Z1Q86W10 505 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 FANCMQ8IYD8 2048 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 UBALD2Q8IYN6 164 aa4.59□□□□□ -1.67
SRP54-211ENST00000556445 C8orf59Q8N0T1 100 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms