RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 MAGEA13PA6NCF6 341 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF716A6NP11 495 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 KDM4EB2RXH2 506 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF814B7Z6K7 855 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 TRAF3IP2O43734 574 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-218ENST00000556343 SLC16A7O60669 478 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 MRPS14O60783 128 aaKnown RBP8.2□□□□□ -1.1
ACTN1-218ENST00000556343 ENTPD6O75354 484 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 SLC2A10O95528 541 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 GABRB1P18505 474 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 EEF1B2P24534 225 aaKnown RBP8.2□□□□□ -1.1
ACTN1-218ENST00000556343 HTR1FP30939 366 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 CDKN2AP42771 156 aaKnown RBP8.2□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF84P51523 738 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 TDGF1P3P51864 188 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 NFATC3Q12968 1075 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 CRMP1Q14194 572 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 C3AR1Q16581 482 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 ACSF3Q4G176 576 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-218ENST00000556343 MESTQ5EB52 335 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 C1orf185Q5T7R7 199 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 B3GNT6Q6ZMB0 384 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 ADGRE4PQ86SQ3 457 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 CD163Q86VB7 1156 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 CCDC71Q8IV32 467 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF100Q8IYN0 542 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 STX19Q8N4C7 294 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 POMGNT2Q8NAT1 580 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 CYB561A3Q8NBI2 242 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 ST6GALNAC3Q8NDV1 305 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 PROKR2Q8NFJ6 384 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 CNIH3Q8TBE1 160 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 ABHD3Q8WU67 409 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 UBE2FQ969M7 185 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 MRPL48Q96GC5 212 aaKnown RBP8.2□□□□□ -1.1
ACTN1-218ENST00000556343 TXNDC15Q96J42 360 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF582Q96NG8 517 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-218ENST00000556343 SRA1Q9HD15 236 aaKnown RBP8.2□□□□□ -1.1
ACTN1-218ENST00000556343 RPRD1BQ9NQG5 326 aaKnown RBP8.2□□□□□ -1.1
ACTN1-218ENST00000556343 UBAP1Q9NZ09 502 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 GLTPQ9NZD2 209 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 CNOT2Q9NZN8 540 aaKnown RBP8.2□□□□□ -1.1
ACTN1-218ENST00000556343 UPB1Q9UBR1 384 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 GPR52Q9Y2T5 361 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 FLVCR1Q9Y5Y0 555 aa8.2□□□□□ -1.1
ACTN1-218ENST00000556343 PIEZO2Q9H5I5 2752 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 OR6C68A6NDL8 312 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 FAM183AA6NL82 134 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 PTGES3LE9PB15 166 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 SLC1A7O00341 560 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 ATXN7O15265 892 aaPredicted RBP8.19□□□□□ -1.1
ACTN1-218ENST00000556343 SLC19A2O60779 497 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 RAMP1O60894 148 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 TMCC2O75069 709 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 SS18L1O75177 396 aaPredicted RBP8.19□□□□□ -1.1
ACTN1-218ENST00000556343 WBP4O75554 376 aaKnown RBP8.19□□□□□ -1.1
ACTN1-218ENST00000556343 AQP8O94778 261 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 GLCEO94923 617 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 FADS2O95864 444 aaKnown RBP8.19□□□□□ -1.1
ACTN1-218ENST00000556343 TGM6O95932 706 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 FMO3P31513 532 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 TIMP3P35625 211 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 MTNR1AP48039 350 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 GABARAPL2P60520 117 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 GLO1Q04760 184 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 RAB40BQ12829 278 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 CAMK2DQ13557 499 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 APOFQ13790 326 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 STK11Q15831 433 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF362Q5T0B9 420 aaPredicted RBP8.19□□□□□ -1.1
ACTN1-218ENST00000556343 AADACL4Q5VUY2 407 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 CARD17Q5XLA6 110 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 NHLRC1Q6VVB1 395 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 RPTNQ6XPR3 784 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 TUSC5Q8IXB3 177 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 C20orf196Q8IYI0 205 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 NOXO1Q8NFA2 376 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 OR10H5Q8NGA6 315 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 PTP4A1Q93096 173 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 APH1AQ96BI3 265 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 RNFT2Q96EX2 444 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF385AQ96PM9 386 aaKnown RBP8.19□□□□□ -1.1
ACTN1-218ENST00000556343 KCNK17Q96T54 332 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 TEAD3Q99594 435 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 EMC6Q9BV81 110 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 ULBP2Q9BZM5 246 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 LINC00470Q9BZP3 86 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 RACGAP1Q9H0H5 632 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 SYT4Q9H2B2 425 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 RERGLQ9H628 205 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 VCX3AQ9NNX9 186 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 HINT3Q9NQE9 182 aaKnown RBP8.19□□□□□ -1.1
ACTN1-218ENST00000556343 HAO2Q9NYQ3 351 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 DNAJC27Q9NZQ0 273 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 CLCF1Q9UBD9 225 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 B9D1Q9UPM9 204 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 SNX5Q9Y5X3 404 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 SPTA1P02549 2419 aa8.19□□□□□ -1.1
ACTN1-218ENST00000556343 A0A087WXM4 84 aa8.18□□□□□ -1.1
ACTN1-218ENST00000556343 MBD3L4A6NDZ8 208 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms