RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 TPK1Q9H3S4 243 aa17■□□□□ 0.31
PRKCH-219ENST00000555906 NDUFAF1Q9Y375 327 aa17■□□□□ 0.31
PRKCH-219ENST00000555906 SH3PXD2BA1X283 911 aa16.99■□□□□ 0.31
PRKCH-219ENST00000555906 CPSF4LA6NMK7 179 aaKnown RBP16.99■□□□□ 0.31
PRKCH-219ENST00000555906 ANGPT2O15123 496 aa16.99■□□□□ 0.31
PRKCH-219ENST00000555906 ENTPD5O75356 428 aa16.99■□□□□ 0.31
PRKCH-219ENST00000555906 OR6A2O95222 327 aa16.99■□□□□ 0.31
PRKCH-219ENST00000555906 IFNGR1P15260 489 aa16.99■□□□□ 0.31
PRKCH-219ENST00000555906 APEX1P27695 318 aaKnown RBP16.99■□□□□ 0.31
PRKCH-219ENST00000555906 GIPRP48546 466 aa16.99■□□□□ 0.31
PRKCH-219ENST00000555906 SELPLGQ14242 412 aa16.99■□□□□ 0.31
PRKCH-219ENST00000555906 FXNQ16595 210 aa16.99■□□□□ 0.31
PRKCH-219ENST00000555906 CR1LQ2VPA4 569 aa16.99■□□□□ 0.31
PRKCH-219ENST00000555906 ADAMTS16Q8TE57 1224 aa16.99■□□□□ 0.31
PRKCH-219ENST00000555906 TMEM54Q969K7 222 aa16.99■□□□□ 0.31
PRKCH-219ENST00000555906 SLC19A3Q9BZV2 496 aa16.99■□□□□ 0.31
PRKCH-219ENST00000555906 SLC7A8Q9UHI5 535 aa16.99■□□□□ 0.31
PRKCH-219ENST00000555906 C11orf98E9PRG8 122 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 M0QX08 132 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 LYPD3O95274 346 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 IL2RGP31785 369 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 PCGF2P35227 344 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 RAB1AP62820 205 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 GALK2Q01415 458 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 ZP4Q12836 540 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 UGT2A3Q6UWM9 527 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 SLC35D2Q76EJ3 337 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 PIWIL3Q7Z3Z3 882 aaKnown RBP16.98■□□□□ 0.31
PRKCH-219ENST00000555906 PATL1Q86TB9 770 aaKnown RBP16.98■□□□□ 0.31
PRKCH-219ENST00000555906 RETREG3Q86VR2 466 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 TSPEARQ8WU66 669 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 C1orf159Q96HA4 380 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 SNX18Q96RF0 628 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 ZNF426Q9BUY5 554 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 PCDHAC1Q9H158 963 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 MS4A5Q9H3V2 200 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 KAT8Q9H7Z6 458 aaKnown RBP16.98■□□□□ 0.31
PRKCH-219ENST00000555906 NANSQ9NR45 359 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 GLTPQ9NZD2 209 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 ZNF229Q9UJW7 825 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 TRIM33Q9UPN9 1127 aa16.98■□□□□ 0.31
PRKCH-219ENST00000555906 TRAPPC13A5PLN9 417 aa16.97■□□□□ 0.31
PRKCH-219ENST00000555906 THY1P04216 161 aa16.97■□□□□ 0.31
PRKCH-219ENST00000555906 CD247P20963 164 aa16.97■□□□□ 0.31
PRKCH-219ENST00000555906 LSP1P33241 339 aa16.97■□□□□ 0.31
PRKCH-219ENST00000555906 CDH15P55291 814 aa16.97■□□□□ 0.31
PRKCH-219ENST00000555906 INTS11Q5TA45 600 aaKnown RBP16.97■□□□□ 0.31
PRKCH-219ENST00000555906 GKAP1Q5VSY0 366 aaPredicted RBP16.97■□□□□ 0.31
PRKCH-219ENST00000555906 TTC33Q6PID6 262 aaPredicted RBP16.97■□□□□ 0.31
PRKCH-219ENST00000555906 ZNF584Q8IVC4 421 aa16.97■□□□□ 0.31
PRKCH-219ENST00000555906 LINC01356Q8N9X3 169 aa16.97■□□□□ 0.31
PRKCH-219ENST00000555906 OR4D11Q8NGI4 311 aa16.97■□□□□ 0.31
PRKCH-219ENST00000555906 VANGL1Q8TAA9 524 aaPredicted RBP16.97■□□□□ 0.31
PRKCH-219ENST00000555906 ZNF566Q969W8 418 aa16.97■□□□□ 0.31
PRKCH-219ENST00000555906 MPP4Q96JB8 637 aa16.97■□□□□ 0.31
PRKCH-219ENST00000555906 C19orf24Q9BVV8 132 aa16.97■□□□□ 0.31
PRKCH-219ENST00000555906 INTS9Q9NV88 658 aaKnown RBP16.97■□□□□ 0.31
PRKCH-219ENST00000555906 REV1Q9UBZ9 1251 aa16.97■□□□□ 0.31
PRKCH-219ENST00000555906 SLC7A7Q9UM01 511 aa16.97■□□□□ 0.31
PRKCH-219ENST00000555906 CH25HO95992 272 aa16.96■□□□□ 0.31
PRKCH-219ENST00000555906 VIMP08670 466 aaKnown RBP16.96■□□□□ 0.31
PRKCH-219ENST00000555906 NFYCQ13952 458 aa16.96■□□□□ 0.31
PRKCH-219ENST00000555906 RAB39AQ14964 217 aa16.96■□□□□ 0.31
PRKCH-219ENST00000555906 TRIP10Q15642 601 aa16.96■□□□□ 0.31
PRKCH-219ENST00000555906 REP15Q6BDI9 236 aa16.96■□□□□ 0.31
PRKCH-219ENST00000555906 TSPYL5Q86VY4 417 aaPredicted RBP16.96■□□□□ 0.31
PRKCH-219ENST00000555906 RBM45Q8IUH3 476 aaKnown RBP16.96■□□□□ 0.31
PRKCH-219ENST00000555906 SLC22A24Q8N4F4 322 aa16.96■□□□□ 0.31
PRKCH-219ENST00000555906 RASSF5Q8WWW0 418 aa16.96■□□□□ 0.31
PRKCH-219ENST00000555906 TAMM41Q96BW9 452 aa16.96■□□□□ 0.31
PRKCH-219ENST00000555906 SLC25A44Q96H78 314 aaPredicted RBP16.96■□□□□ 0.31
PRKCH-219ENST00000555906 MAGEB18Q96M61 343 aa16.96■□□□□ 0.31
PRKCH-219ENST00000555906 SYT3Q9BQG1 590 aa16.96■□□□□ 0.31
PRKCH-219ENST00000555906 TMEM38BQ9NVV0 291 aa16.96■□□□□ 0.31
PRKCH-219ENST00000555906 TAS2R5Q9NYW4 299 aa16.96■□□□□ 0.31
PRKCH-219ENST00000555906 KPNA4O00629 521 aaPredicted RBP16.95■□□□□ 0.3
PRKCH-219ENST00000555906 RNF13O43567 381 aa16.95■□□□□ 0.3
PRKCH-219ENST00000555906 SERPINA5P05154 406 aa16.95■□□□□ 0.3
PRKCH-219ENST00000555906 ASAH2BP0C7U1 165 aa16.95■□□□□ 0.3
PRKCH-219ENST00000555906 PGA4P0DJD7 388 aa16.95■□□□□ 0.3
PRKCH-219ENST00000555906 PGA3P0DJD8 388 aa16.95■□□□□ 0.3
PRKCH-219ENST00000555906 OR8G3PP0DMU2 310 aa16.95■□□□□ 0.3
PRKCH-219ENST00000555906 MELKQ14680 651 aa16.95■□□□□ 0.3
PRKCH-219ENST00000555906 ELFN2Q5R3F8 820 aa16.95■□□□□ 0.3
PRKCH-219ENST00000555906 NANOGNBQ7Z5D8 188 aa16.95■□□□□ 0.3
PRKCH-219ENST00000555906 DPPA2Q7Z7J5 298 aa16.95■□□□□ 0.3
PRKCH-219ENST00000555906 SKA3Q8IX90 412 aa16.95■□□□□ 0.3
PRKCH-219ENST00000555906 SIKE1Q9BRV8 207 aa16.95■□□□□ 0.3
PRKCH-219ENST00000555906 MYEF2Q9P2K5 600 aaKnown RBP16.95■□□□□ 0.3
PRKCH-219ENST00000555906 HMGB1P1B2RPK0 211 aaPredicted RBP16.94■□□□□ 0.3
PRKCH-219ENST00000555906 LYNX1G3V0Z9 82 aa16.94■□□□□ 0.3
PRKCH-219ENST00000555906 DHHO43323 396 aa16.94■□□□□ 0.3
PRKCH-219ENST00000555906 FARS2O95363 451 aaKnown RBP16.94■□□□□ 0.3
PRKCH-219ENST00000555906 LYNX1P0DP58 116 aa16.94■□□□□ 0.3
PRKCH-219ENST00000555906 ACHEP22303 614 aa16.94■□□□□ 0.3
PRKCH-219ENST00000555906 ALDH3B1P43353 468 aa16.94■□□□□ 0.3
PRKCH-219ENST00000555906 CRYBA2P53672 197 aa16.94■□□□□ 0.3
PRKCH-219ENST00000555906 NRN1LQ496H8 165 aa16.94■□□□□ 0.3
PRKCH-219ENST00000555906 LRRC17Q8N6Y2 441 aa16.94■□□□□ 0.3
PRKCH-219ENST00000555906 OR10A6Q8NH74 314 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms