RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 PPP1R2P9O14990 202 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 CLDN3O15551 220 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 GABARAPO95166 117 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 FABP3P05413 133 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 GKN3PP0CG01 181 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 HSMCR30P0CW71 290 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 IL10P22301 178 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 HTR2AP28223 471 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 LAP3P28838 519 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 TGFBR1P36897 503 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 DDOSTP39656 456 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 RPL13AP40429 203 aaKnown RBP0.86□□□□□ -2.27
SRP54-207ENST00000555535 MDH1P40925 334 aaKnown RBP0.86□□□□□ -2.27
SRP54-207ENST00000555535 NCBP2P52298 156 aaKnown RBP eCLIP0.86□□□□□ -2.27
SRP54-207ENST00000555535 RAP1AP62834 184 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 MEF2CQ06413 473 aaPredicted RBP0.86□□□□□ -2.27
SRP54-207ENST00000555535 IL15RAQ13261 267 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 AQP6Q13520 282 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 C1orf61Q13536 156 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 VGLL4Q14135 290 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 PDK4Q16654 411 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 CARD16Q5EG05 197 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 PHYHD1Q5SRE7 291 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 BEND3Q5T5X7 828 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 DNAJC24Q6P3W2 148 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 Q6ZS52 159 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 OR4D5Q8NGN0 318 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 THRSPQ92748 146 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 TBRG4Q969Z0 631 aaKnown RBP eCLIP0.86□□□□□ -2.27
SRP54-207ENST00000555535 SGK3Q96BR1 496 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 EFHD2Q96C19 240 aaPredicted RBP0.86□□□□□ -2.27
SRP54-207ENST00000555535 L3HYPDHQ96EM0 354 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 C7orf34Q96L11 122 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 WFIKKN1Q96NZ8 548 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 OXGR1Q96P68 337 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 TGM7Q96PF1 710 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 RBM14Q96PK6 669 aaKnown RBP0.86□□□□□ -2.27
SRP54-207ENST00000555535 LZTS2Q9BRK4 669 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 NIPSNAP3BQ9BS92 247 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 CAPS2Q9BXY5 557 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 NHEJ1Q9H9Q4 299 aaPredicted RBP0.86□□□□□ -2.27
SRP54-207ENST00000555535 LIN28AQ9H9Z2 209 aaKnown RBP0.86□□□□□ -2.27
SRP54-207ENST00000555535 CTPS2Q9NRF8 586 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 NUDT15Q9NV35 164 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.86□□□□□ -2.27
SRP54-207ENST00000555535 TAS2R3Q9NYW6 316 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 CALYQ9NYX4 217 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 BFARQ9NZS9 450 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 SPATA7Q9P0W8 599 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 RNF14Q9UBS8 474 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 PCSK1NQ9UHG2 260 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 CTNNA3Q9UI47 895 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 TMCO1Q9UM00 188 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 RPH3ALQ9UNE2 315 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 SNX6Q9UNH7 406 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 KIF3AQ9Y496 699 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 U3KQV3 271 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 ZNF407Q9C0G0 2248 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 COL11A1P12107 1806 aaPredicted RBP0.86□□□□□ -2.27
SRP54-207ENST00000555535 PTPRTO14522 1441 aa0.86□□□□□ -2.27
SRP54-207ENST00000555535 RPAP1Q9BWH6 1393 aaPredicted RBP0.85□□□□□ -2.27
SRP54-207ENST00000555535 WDR62O43379 1518 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 F5H6K3 240 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 LOC110117498-PIK3R3F6TDL0 507 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 H0YHG0 523 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 H3BNH8 94 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 K7EQM0 130 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 TAPBPO15533 448 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 MFN2O95140 757 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 BGLAPP02818 100 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 ZNF806P0C7X5 589 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 UBTFL1P0CB47 393 aaPredicted RBP0.85□□□□□ -2.27
SRP54-207ENST00000555535 IGHV3-43DP0DP04 118 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 POU2F1P14859 743 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 PSMA5P28066 241 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 CCR1P32246 355 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 CD86P42081 329 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 CDKN1BP46527 198 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 QARSP47897 775 aaKnown RBP0.85□□□□□ -2.27
SRP54-207ENST00000555535 CYB561P49447 251 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 ACADVLP49748 655 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 PRMT2P55345 433 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 SLC7A9P82251 487 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 CBX1P83916 185 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 HTD2P86397 168 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 PITPNAQ00169 270 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 KLRC3Q07444 240 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 NCBP1Q09161 790 aaKnown RBP0.85□□□□□ -2.27
SRP54-207ENST00000555535 SCRN3Q0VDG4 424 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 OR5I1Q13606 314 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 SLC36A3Q495N2 470 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 NADK2Q4G0N4 442 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 HES5Q5TA89 166 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 TMEM225Q6GV28 225 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 SASS6Q6UVJ0 657 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 CES3Q6UWW8 571 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 SYT10Q6XYQ8 523 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 DHDDSQ86SQ9 333 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 BIVMQ86UB2 503 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 PLA2G4DQ86XP0 818 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms