RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, human

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDR39U1-208	ENST00000554698	HMBOX1	Q6NT76	420 aa		18.85	■□□□□ 0.61
SDR39U1-208	ENST00000554698	RASSF6	Q6ZTQ3	369 aa		18.85	■□□□□ 0.61
SDR39U1-208	ENST00000554698	C22orf34	Q6ZV56	151 aa		18.85	■□□□□ 0.61
SDR39U1-208	ENST00000554698	C1orf162	Q8NEQ5	155 aa	Predicted RBP	18.85	■□□□□ 0.61
SDR39U1-208	ENST00000554698	OR6N1	Q8NGY5	312 aa		18.85	■□□□□ 0.61
SDR39U1-208	ENST00000554698	FAM222B	Q8WU58	562 aa		18.85	■□□□□ 0.61
SDR39U1-208	ENST00000554698	BOD1	Q96IK1	185 aa		18.85	■□□□□ 0.61
SDR39U1-208	ENST00000554698	WFIKKN1	Q96NZ8	548 aa		18.85	■□□□□ 0.61
SDR39U1-208	ENST00000554698	NIPSNAP1	Q9BPW8	284 aa		18.85	■□□□□ 0.61
SDR39U1-208	ENST00000554698	CRLF2	Q9HC73	371 aa		18.85	■□□□□ 0.61
SDR39U1-208	ENST00000554698	KCNN3	Q9UGI6	736 aa		18.85	■□□□□ 0.61
SDR39U1-208	ENST00000554698	NDRG3	Q9UGV2	375 aa		18.85	■□□□□ 0.61
SDR39U1-208	ENST00000554698	CDH10	Q9Y6N8	788 aa		18.85	■□□□□ 0.61
SDR39U1-208	ENST00000554698	TRMU	O75648	421 aa	Known RBP	18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	APEH	P13798	732 aa	Known RBP	18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	SLC6A6	P31641	620 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	TGFBR3	Q03167	851 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	COX10	Q12887	443 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	GABRA6	Q16445	453 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	C9orf135	Q5VTT2	229 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	RPL13AP3	Q6NVV1	102 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	AMIGO2	Q86SJ2	522 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	CLDN22	Q8N7P3	220 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	ARIH2OS	Q8N7S6	290 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	NOXO1	Q8NFA2	376 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	OR5K1	Q8NHB7	308 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	CENPN	Q96H22	339 aa	Predicted RBP	18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	MUS81	Q96NY9	551 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	ULBP2	Q9BZM5	246 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	EGLN3	Q9H6Z9	239 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	B3GAT2	Q9NPZ5	323 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	IL20	Q9NYY1	176 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	GLTP	Q9NZD2	209 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	MAGED1	Q9Y5V3	778 aa	Predicted RBP	18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	CENPE	Q02224	2701 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	UNC79	Q9P2D8	2635 aa		18.84	■□□□□ 0.61
SDR39U1-208	ENST00000554698	ERICH4	A6NGS2	130 aa		18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698		A6NIZ1	184 aa		18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	ANKRD65	E5RJM6	399 aa		18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	RAD51D	O75771	328 aa		18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	TXNDC12	O95881	172 aa		18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	PRKACG	P22612	351 aa		18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	ACVR1B	P36896	505 aa		18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	SH3BGR	P55822	239 aa	Predicted RBP	18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	RAP1B	P61224	184 aa		18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	RAP1A	P62834	184 aa		18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	STK11	Q15831	433 aa		18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	GPR139	Q6DWJ6	353 aa		18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	OR7E24	Q6IFN5	339 aa		18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	LRFN4	Q6PJG9	635 aa		18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	HDAC2	Q92769	488 aa	Known RBP	18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	NMD3	Q96D46	503 aa	Known RBP	18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	ZNF837	Q96EG3	531 aa	Predicted RBP	18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	SAMD8	Q96LT4	415 aa		18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698		Q96M85	177 aa		18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	KCNK17	Q96T54	332 aa		18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	MED18	Q9BUE0	208 aa		18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	GRHPR	Q9UBQ7	328 aa		18.83	■□□□□ 0.61
SDR39U1-208	ENST00000554698	ALPK2	Q86TB3	2170 aa		18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	CIB4	A0PJX0	185 aa		18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	OR5H1	A6NKK0	313 aa		18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ARPC3	O15145	178 aa		18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	TP53	P04637	393 aa	Predicted RBP	18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	THBD	P07204	575 aa		18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	EPX	P11678	715 aa		18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ANXA8	P13928	327 aa		18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	SDHA	P31040	664 aa		18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	CLRN1	P58418	232 aa		18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	CEACAM16	Q2WEN9	425 aa		18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	FAHD1	Q6P587	224 aa		18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	P2RY8	Q86VZ1	359 aa		18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	HIPK1	Q86Z02	1210 aa		18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	C17orf78	Q8N4C9	275 aa		18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	PKP2	Q99959	881 aa		18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ALG12	Q9BV10	488 aa		18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	S100A14	Q9HCY8	104 aa		18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	IER3IP1	Q9Y5U9	82 aa		18.82	■□□□□ 0.6
SDR39U1-208	ENST00000554698	TEX13C	A0A0J9YWL9	993 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	RPS6KA3	P51812	740 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ZNF133	P52736	654 aa	Predicted RBP	18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	MEST	Q5EB52	335 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	TIMM23B	Q5SRD1	257 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	KLHL17	Q6TDP4	642 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	SVOPL	Q8N434	492 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	SYT14	Q8NB59	555 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	OR8D4	Q8NGM9	314 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	OR1K1	Q8NGR3	316 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	MAGEE2	Q8TD90	523 aa	Predicted RBP	18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	HSD17B8	Q92506	261 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ZNF570	Q96NI8	536 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	IFT27	Q9BW83	186 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	PLA2G12A	Q9BZM1	189 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	SEMA6A	Q9H2E6	1030 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	REV1	Q9UBZ9	1251 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	ZNF99	A8MXY4	864 aa	Predicted RBP	18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698		G3V2T6	193 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	IMPA2	O14732	288 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	PPP1R3D	O95685	299 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	QDPR	P09417	244 aa		18.81	■□□□□ 0.6
SDR39U1-208	ENST00000554698	CDH2	P19022	906 aa	Predicted RBP	18.81	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms