RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 ATAD3BQ5T9A4 648 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 C3orf33Q6P1S2 294 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 STAC2Q6ZMT1 411 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 ZNF836Q6ZNA1 936 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 LRRC74BQ6ZQY2 392 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 ZNF621Q6ZSS3 439 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 EIF3MQ7L2H7 374 aaKnown RBP3.66□□□□□ -1.82
VTI1B-203ENST00000554636 FCRLAQ7L513 359 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 NUFIP2Q7Z417 695 aaKnown RBP3.66□□□□□ -1.82
VTI1B-203ENST00000554636 GRINAQ7Z429 371 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 FUNDC1Q8IVP5 155 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 UEVLDQ8IX04 471 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 GABRG1Q8N1C3 465 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 ATP6V1C2Q8NEY4 427 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 VPS37AQ8NEZ2 397 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 PNPT1Q8TCS8 783 aaKnown RBP3.66□□□□□ -1.82
VTI1B-203ENST00000554636 WIPF2Q8TF74 440 aaPredicted RBP3.66□□□□□ -1.82
VTI1B-203ENST00000554636 WDR60Q8WVS4 1066 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 CNOT9Q92600 299 aaKnown RBP3.66□□□□□ -1.82
VTI1B-203ENST00000554636 OSTF1Q92882 214 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 CPNE4Q96A23 557 aaPredicted RBP3.66□□□□□ -1.82
VTI1B-203ENST00000554636 SLC25A28Q96A46 364 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 VPS33AQ96AX1 596 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 AURKBQ96GD4 344 aaPredicted RBP3.66□□□□□ -1.82
VTI1B-203ENST00000554636 TRNT1Q96Q11 434 aaKnown RBP3.66□□□□□ -1.82
VTI1B-203ENST00000554636 OR5B2Q96R09 309 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 OR52E6Q96RD3 313 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 PANX1Q96RD7 426 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 ZBTB18Q99592 522 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 PSD2Q9BQI7 771 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 EBF4Q9BQW3 602 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 CCDC28BQ9BUN5 200 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 CCDC106Q9BWC9 280 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 PRRG4Q9BZD6 226 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 PAIP1Q9H074 479 aaKnown RBP3.66□□□□□ -1.82
VTI1B-203ENST00000554636 AAMDCQ9H7C9 122 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 PLSCR4Q9NRQ2 329 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 GLRX2Q9NS18 164 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 KLHL28Q9NXS3 571 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 LIPT1Q9Y234 373 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 SLC35A3Q9Y2D2 325 aa3.66□□□□□ -1.82
VTI1B-203ENST00000554636 IGKV3D-15A0A087WSY6 115 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 A0A096LPI6 279 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 TRBV5-3A0A0A0MS03 114 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 TMEM272A0A1B0GTI8 110 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.65□□□□□ -1.83
VTI1B-203ENST00000554636 TMEM72A0PK05 275 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 FAM90A10PA6NDY2 464 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF716A6NP11 495 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF724A8MTY0 619 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 HMGB1P1B2RPK0 211 aaPredicted RBP3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF814B7Z6K7 855 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 J3KTA2 159 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 FAAHO00519 579 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 UBDO15205 165 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 CYTIPO60759 359 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 RAMP1O60894 148 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 TGDSO95455 350 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 PLGP00747 810 aaPredicted RBP3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ALPLP05186 524 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 BCHEP06276 602 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 TFPTP0C1Z6 253 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 PABPC4LP0CB38 370 aaKnown RBP3.65□□□□□ -1.83
VTI1B-203ENST00000554636 NR2F1P10589 423 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ETFAP13804 333 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 PSMB1P20618 241 aaKnown RBP3.65□□□□□ -1.83
VTI1B-203ENST00000554636 TNFSF4P23510 183 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 DNASE1P24855 282 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ACAA2P42765 397 aaKnown RBP3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ATP4BP51164 291 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 POLR2JP52435 117 aaKnown RBP3.65□□□□□ -1.83
VTI1B-203ENST00000554636 DSTNP60981 165 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 KCNJ10P78508 379 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 MERTKQ12866 999 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 EPS8Q12929 822 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 FOXD4Q12950 439 aaPredicted RBP3.65□□□□□ -1.83
VTI1B-203ENST00000554636 RNPS1Q15287 305 aaKnown RBP3.65□□□□□ -1.83
VTI1B-203ENST00000554636 TSC22D1Q15714 1073 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 DEFB113Q30KQ7 82 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ANXA2RQ3ZCQ2 193 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 LIN52Q52LA3 116 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 BEX5Q5H9J7 111 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 LRIF1Q5T3J3 769 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 RUSC1-AS1Q66K80 236 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 C16orf89Q6UX73 402 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 TMPPEQ6ZT21 453 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 VRK2Q86Y07 508 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 TGIF2LYQ8IUE0 185 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 TUSC5Q8IXB3 177 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 MSRB3Q8IXL7 192 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 C10orf111Q8N326 155 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 SLC43A2Q8N370 569 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ARFGAP2Q8N6H7 521 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 TRIML2Q8N7C3 387 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 OR52L2PQ8NGH6 319 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF563Q8TA94 476 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 LRRC8CQ8TDW0 803 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 CKAP2Q8WWK9 683 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 TMEM234Q8WY98 164 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 GTF2H4Q92759 462 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms