RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 HPXP02790 462 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 CSF1P09603 554 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 SLC35G4P0C7Q5 338 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 GABRG2P18507 467 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 CXCL3P19876 107 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 SHC1P29353 583 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 ACSL1P33121 698 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 BUD31P41223 144 aaPredicted RBP3.09□□□□□ -1.91
SEC23A-207ENST00000554615 UCP3P55916 312 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 ARF3P61204 181 aaPredicted RBP3.09□□□□□ -1.91
SEC23A-207ENST00000554615 BTG2P78543 158 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 TAGLNQ01995 201 aaKnown RBP3.09□□□□□ -1.91
SEC23A-207ENST00000554615 BTBD16Q32M84 506 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 ACSM3Q53FZ2 586 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 TOR2AQ5JU69 321 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 TMEM268Q5VZI3 342 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 KLHL24Q6TFL4 600 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 APOOLQ6UXV4 268 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 COLCA1Q6ZS62 124 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF429Q86V71 674 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 SPERTQ8NA61 448 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 BVESQ8NE79 360 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 OR4D9Q8NGE8 314 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 OR5M8Q8NGP6 311 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 OR5AK2Q8NH90 309 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 TRMT10AQ8TBZ6 339 aaKnown RBP3.09□□□□□ -1.91
SEC23A-207ENST00000554615 POC1BQ8TC44 478 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 MITD1Q8WV92 249 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF845Q96IR2 970 aaPredicted RBP3.09□□□□□ -1.91
SEC23A-207ENST00000554615 AQP10Q96PS8 301 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 UCN2Q96RP3 112 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 MESP1Q9BRJ9 268 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 MMP28Q9H239 520 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 LRRN3Q9H3W5 708 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 ZCCHC3Q9NUD5 404 aaKnown RBP3.09□□□□□ -1.91
SEC23A-207ENST00000554615 IMPAD1Q9NX62 359 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 WSB2Q9NYS7 404 aaPredicted RBP3.09□□□□□ -1.91
SEC23A-207ENST00000554615 AKAP7Q9P0M2 348 aaPredicted RBP3.09□□□□□ -1.91
SEC23A-207ENST00000554615 DEC1Q9P2X7 70 aa3.09□□□□□ -1.91
SEC23A-207ENST00000554615 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 GNG14A0A1W2PPG7 69 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 A0A1W2PRG6 482 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 ACOT7O00154 380 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 FRS3O43559 492 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 B3GALT2O43825 422 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 RNH1P13489 461 aaKnown RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 ZNF3P17036 446 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 IBSPP21815 317 aaPredicted RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 CRYGSP22914 178 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 EEF1B2P24534 225 aaKnown RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 MAT2AP31153 395 aaKnown RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 TMED10P49755 219 aaKnown RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 GDI2P50395 445 aaKnown RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 H2BFSP57053 126 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 TAS2R20P59543 309 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 RPS26P62854 115 aaKnown RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 INSM1Q01101 510 aaPredicted RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 ZNF117Q03924 483 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 SLC17A1Q14916 467 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 EBPQ15125 230 aaKnown RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 MED22Q15528 200 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 RSPO1Q2MKA7 263 aaPredicted RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 ZNF750Q32MQ0 723 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 PERM1Q5SV97 790 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 MRPL14Q6P1L8 145 aaKnown RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 Q6ZTK2 550 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 PUSL1Q8N0Z8 303 aaKnown RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 ZNF283Q8N7M2 679 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 OR10G4Q8NGN3 311 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 ZNF417Q8TAU3 575 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 SCARB1Q8WTV0 552 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 FOXRED1Q96CU9 486 aaPredicted RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 SEH1LQ96EE3 360 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 MRPS24Q96EL2 167 aaKnown RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 ADGRG7Q96K78 797 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 HS3ST6Q96QI5 342 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 SLC38A3Q99624 504 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 SLC25A21Q9BQT8 299 aaPredicted RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 YIPF4Q9BSR8 244 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 RTN4RQ9BZR6 473 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 WDR54Q9H977 334 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 SLC2A9Q9NRM0 540 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 FAM212BQ9NTI7 297 aaPredicted RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 C14orf119Q9NWQ9 140 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 TVP23BQ9NYZ1 205 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 GHRLQ9UBU3 117 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 NUFIP1Q9UHK0 495 aaKnown RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 HSF4Q9ULV5 492 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 MED31Q9Y3C7 131 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 PTRH2Q9Y3E5 179 aaKnown RBP3.09□□□□□ -1.92
SEC23A-207ENST00000554615 BRCA2P51587 3418 aa3.09□□□□□ -1.92
SEC23A-207ENST00000554615 TRAV36DV7A0A075B6V5 113 aa3.08□□□□□ -1.92
SEC23A-207ENST00000554615 TBC1D3DA0A087WVF3 549 aa3.08□□□□□ -1.92
SEC23A-207ENST00000554615 LOC105369274A0A096LPK9 316 aa3.08□□□□□ -1.92
SEC23A-207ENST00000554615 LOC102723532A0A0G2JNH3 316 aa3.08□□□□□ -1.92
SEC23A-207ENST00000554615 TEX13DA0A0J9YY54 714 aaPredicted RBP3.08□□□□□ -1.92
SEC23A-207ENST00000554615 FAM90A10PA6NDY2 464 aa3.08□□□□□ -1.92
SEC23A-207ENST00000554615 FAM90A18PA6NE21 464 aa3.08□□□□□ -1.92
SEC23A-207ENST00000554615 FAM90A16PA6NEW6 464 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms