RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 CYLC2Q14093 348 aaPredicted RBP11.02□□□□□ -0.65
LINC00643-202ENST00000553426 METTL21CQ5VZV1 264 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 UGT2A3Q6UWM9 527 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 LINC00114Q6XXX2 140 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 SLC35D2Q76EJ3 337 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 OR6T1Q8NGN1 323 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 OR10A6Q8NH74 314 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 OR6X1Q8NH79 312 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 UBASH3BQ8TF42 649 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 ZNF566Q969W8 418 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 MSI2Q96DH6 328 aaKnown RBP11.02□□□□□ -0.65
LINC00643-202ENST00000553426 WFDC6Q9BQY6 131 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 SLC19A3Q9BZV2 496 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 KAT8Q9H7Z6 458 aaKnown RBP11.02□□□□□ -0.65
LINC00643-202ENST00000553426 NPHS2Q9NP85 383 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 ZNF229Q9UJW7 825 aa11.02□□□□□ -0.65
LINC00643-202ENST00000553426 M0R233 179 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 KPNA4O00629 521 aaPredicted RBP11.01□□□□□ -0.65
LINC00643-202ENST00000553426 PHF1O43189 567 aaPredicted RBP11.01□□□□□ -0.65
LINC00643-202ENST00000553426 OR8G3PP0DMU2 310 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 IGFBP5P24593 272 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 GIFP27352 417 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 THBS2P35442 1172 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 GLRXP35754 106 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 ZP4Q12836 540 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 SELPLGQ14242 412 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 ZNF74Q16587 644 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 MMEL1Q495T6 779 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 FAM120AOSQ5T036 256 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 REP15Q6BDI9 236 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 HDDC2Q7Z4H3 204 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 NANOGNBQ7Z5D8 188 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 DPPA2Q7Z7J5 298 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 RETREG3Q86VR2 466 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 CDK20Q8IZL9 346 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 ZCCHC24Q8N2G6 241 aaKnown RBP11.01□□□□□ -0.65
LINC00643-202ENST00000553426 ZNF786Q8N393 782 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 HPS1Q92902 700 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 MRPL24Q96A35 216 aaKnown RBP11.01□□□□□ -0.65
LINC00643-202ENST00000553426 SLC25A44Q96H78 314 aaPredicted RBP11.01□□□□□ -0.65
LINC00643-202ENST00000553426 MS4A3Q96HJ5 214 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 ECSITQ9BQ95 431 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 VIPAS39Q9H9C1 493 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 GLTPQ9NZD2 209 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 REV1Q9UBZ9 1251 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 SLC7A7Q9UM01 511 aa11.01□□□□□ -0.65
LINC00643-202ENST00000553426 A0A1W2PRG6 482 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 TMEM129A0AVI4 362 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 BLOC1S5-TXNDC5H3BN57 136 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 EDF1O60869 148 aaKnown RBP11□□□□□ -0.65
LINC00643-202ENST00000553426 BCL10O95999 233 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 IFNA14P01570 189 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 IGHG1P01857 330 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 ZNF35P13682 527 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 ZNF14P17017 642 aaPredicted RBP11□□□□□ -0.65
LINC00643-202ENST00000553426 CLRN1P58418 232 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 SELENOVP59797 346 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 NPTX1Q15818 432 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 VMACQ2NL98 169 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 SLC36A2Q495M3 483 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 TMEM53Q6P2H8 277 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 NHLRC1Q6VVB1 395 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 PHC2Q8IXK0 858 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 SLC22A24Q8N4F4 322 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 ARIH2OSQ8N7S6 290 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 GPR32P1Q8NGA4 272 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 TMEM54Q969K7 222 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 TAMM41Q96BW9 452 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 PCDHAC1Q9H158 963 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 ZNF385DQ9H6B1 395 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 RNF121Q9H920 327 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 SLC7A8Q9UHI5 535 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 GPR160Q9UJ42 338 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 BAG5Q9UL15 447 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 ZNF346Q9UL40 294 aaKnown RBP11□□□□□ -0.65
LINC00643-202ENST00000553426 ANK2Q01484 3957 aa11□□□□□ -0.65
LINC00643-202ENST00000553426 YLPM1P49750 1951 aaKnown RBP10.99□□□□□ -0.65
LINC00643-202ENST00000553426 SLC22A23A1A5C7 686 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 MCIDASD6RGH6 385 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 NPPAP01160 153 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 PTHP01270 115 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 SERPINA5P05154 406 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 TACSTD2P09758 323 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 PCMT1P22061 227 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 ZNF84P51523 738 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 TAS2R41P59536 307 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 RAB39AQ14964 217 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 NANOGP8Q6NSW7 305 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 WDR88Q6ZMY6 472 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 RBM45Q8IUH3 476 aaKnown RBP10.99□□□□□ -0.65
LINC00643-202ENST00000553426 SKA3Q8IX90 412 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 LINC01356Q8N9X3 169 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 MRPL37Q9BZE1 423 aaKnown RBP10.99□□□□□ -0.65
LINC00643-202ENST00000553426 POLR2J2Q9GZM3 115 aaKnown RBP10.99□□□□□ -0.65
LINC00643-202ENST00000553426 POLR2J3Q9H1A7 115 aaKnown RBP10.99□□□□□ -0.65
LINC00643-202ENST00000553426 LRMDAQ9H2I8 198 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 TPK1Q9H3S4 243 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 C1orf198Q9H425 327 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 NANOGQ9H9S0 305 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 TMEM38BQ9NVV0 291 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms