RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 ZP4Q12836 540 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 MELKQ14680 651 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 ARFGEF3Q5TH69 2177 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 HACD2Q6Y1H2 254 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 NKAIN4Q8IVV8 208 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 MICU2Q8IYU8 434 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 ANKS4BQ8N8V4 417 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 C10orf105Q8TEF2 133 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 MS4A3Q96HJ5 214 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 ZNF426Q9BUY5 554 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 MEPEQ9NQ76 525 aaPredicted RBP13.77□□□□□ -0.21
CDK4-215ENST00000553237 B3GNT2Q9NY97 397 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 ZNF229Q9UJW7 825 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 ADAM21Q9UKJ8 722 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 BAG5Q9UL15 447 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 AP3M1Q9Y2T2 418 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 ELOVL7A1L3X0 281 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 BLOC1S5-TXNDC5H3BN57 136 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 ASAH2BP0C7U1 165 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 PATE4P0C8F1 98 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 SLC25A16P16260 332 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 PIN1Q13526 163 aaPredicted RBP13.76□□□□□ -0.21
CDK4-215ENST00000553237 CARTPTQ16568 116 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 GSG1Q2KHT4 349 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 LRRC23Q53EV4 343 aaPredicted RBP13.76□□□□□ -0.21
CDK4-215ENST00000553237 KRT80Q6KB66 452 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 C8orf82Q6P1X6 216 aaPredicted RBP13.76□□□□□ -0.21
CDK4-215ENST00000553237 NUP37Q8NFH4 326 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 OR6X1Q8NH79 312 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 PFN4Q8NHR9 129 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 TMEM54Q969K7 222 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 TNFRSF13CQ96RJ3 184 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 CCT8L2Q96SF2 557 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 FOXB1Q99853 325 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 SLC19A3Q9BZV2 496 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 GLTPQ9NZD2 209 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 RIMS3Q9UJD0 308 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 FKBP7Q9Y680 259 aa13.76□□□□□ -0.21
CDK4-215ENST00000553237 SH3PXD2BA1X283 911 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 VSTM5A8MXK1 200 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 hCG_2039718K7EN88 272 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 NME4O00746 187 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 TLX2O43763 284 aaPredicted RBP13.75□□□□□ -0.21
CDK4-215ENST00000553237 PDE5AO76074 875 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 IFNA14P01570 189 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 FUT1P19526 365 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 NPR2P20594 1047 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 KDELR2P33947 212 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 GIPRP48546 466 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 PTDSS1P48651 473 aaKnown RBP13.75□□□□□ -0.21
CDK4-215ENST00000553237 PDLIM4P50479 330 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 UGT2B15P54855 530 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 PSME3P61289 254 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 LOXL1Q08397 574 aaPredicted RBP13.75□□□□□ -0.21
CDK4-215ENST00000553237 SNTB2Q13425 540 aaKnown RBP13.75□□□□□ -0.21
CDK4-215ENST00000553237 DAG1Q14118 895 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 EFNB3Q15768 340 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 TMEM249Q2WGJ8 235 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 CYBRD1Q53TN4 286 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 LRFN4Q6PJG9 635 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 ZNF627Q7L945 461 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 NANOGNBQ7Z5D8 188 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 SVOPLQ8N434 492 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 IL17RDQ8NFM7 739 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 TMEM255BQ8WV15 326 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 ZNF566Q969W8 418 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 SLC25A44Q96H78 314 aaPredicted RBP13.75□□□□□ -0.21
CDK4-215ENST00000553237 TPD52L3Q96J77 140 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 LRRC37BQ96QE4 947 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 PLK3Q9H4B4 646 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 ZNF442Q9H7R0 627 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 FAM53CQ9NYF3 392 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 ZNF224Q9NZL3 707 aa13.75□□□□□ -0.21
CDK4-215ENST00000553237 TMEM129A0AVI4 362 aa13.74□□□□□ -0.21
CDK4-215ENST00000553237 DCTN3O75935 186 aa13.74□□□□□ -0.21
CDK4-215ENST00000553237 OR5F1O95221 314 aa13.74□□□□□ -0.21
CDK4-215ENST00000553237 BCL10O95999 233 aa13.74□□□□□ -0.21
CDK4-215ENST00000553237 MT-ND1P03886 318 aa13.74□□□□□ -0.21
CDK4-215ENST00000553237 F13BP05160 661 aa13.74□□□□□ -0.21
CDK4-215ENST00000553237 CSF3P09919 207 aa13.74□□□□□ -0.21
CDK4-215ENST00000553237 RAB1AP62820 205 aa13.74□□□□□ -0.21
CDK4-215ENST00000553237 SKA3Q8IX90 412 aa13.74□□□□□ -0.21
CDK4-215ENST00000553237 ZCCHC24Q8N2G6 241 aaKnown RBP13.74□□□□□ -0.21
CDK4-215ENST00000553237 FGFBP3Q8TAT2 258 aa13.74□□□□□ -0.21
CDK4-215ENST00000553237 TMEM239Q8WW34 195 aa13.74□□□□□ -0.21
CDK4-215ENST00000553237 SGTBQ96EQ0 304 aa13.74□□□□□ -0.21
CDK4-215ENST00000553237 ZNF75AQ96N20 296 aa13.74□□□□□ -0.21
CDK4-215ENST00000553237 FOXN4Q96NZ1 517 aa13.74□□□□□ -0.21
CDK4-215ENST00000553237 DOK1Q99704 481 aa13.74□□□□□ -0.21
CDK4-215ENST00000553237 C20orf141Q9NUB4 165 aa13.74□□□□□ -0.21
CDK4-215ENST00000553237 A8MV72 311 aaPredicted RBP13.73□□□□□ -0.21
CDK4-215ENST00000553237 NDUFAB1O14561 156 aa13.73□□□□□ -0.21
CDK4-215ENST00000553237 OR7A10O76100 309 aa13.73□□□□□ -0.21
CDK4-215ENST00000553237 RAB36O95755 333 aa13.73□□□□□ -0.21
CDK4-215ENST00000553237 QDPRP09417 244 aa13.73□□□□□ -0.21
CDK4-215ENST00000553237 ZNF14P17017 642 aaPredicted RBP13.73□□□□□ -0.21
CDK4-215ENST00000553237 USF1P22415 310 aaPredicted RBP13.73□□□□□ -0.21
CDK4-215ENST00000553237 NR4A1P22736 598 aa13.73□□□□□ -0.21
CDK4-215ENST00000553237 AQP2P41181 271 aa13.73□□□□□ -0.21
CDK4-215ENST00000553237 RBM34P42696 430 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms