RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 LRIT1Q9P2V4 623 aa4.93□□□□□ -1.62
LIMA1-212ENST00000552491 MTFP1Q9UDX5 166 aa4.93□□□□□ -1.62
LIMA1-212ENST00000552491 ZNF230Q9UIE0 474 aaPredicted RBP4.93□□□□□ -1.62
LIMA1-212ENST00000552491 HEBP2Q9Y5Z4 205 aa4.93□□□□□ -1.62
LIMA1-212ENST00000552491 ETV7Q9Y603 341 aa4.93□□□□□ -1.62
LIMA1-212ENST00000552491 PCNX3Q9H6A9 2034 aa4.93□□□□□ -1.62
LIMA1-212ENST00000552491 DOCK8Q8NF50 2099 aa4.93□□□□□ -1.62
LIMA1-212ENST00000552491 A0A087WUJ7 227 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 TRAV14DV4A0A0A6YYC5 116 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 TRBV5-5A0A0J9YX44 114 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 UBE2QL1A1L167 161 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 OR4C45A6NMZ5 311 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 NPIPB9F8W1W9 429 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 H3BUI4 141 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 ARPC3O15145 178 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 XRCC3O43542 346 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 TNFSF14O43557 240 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 HPP00738 406 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 TIMP1P01033 207 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 FBXO45P0C2W1 286 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 VSIG8P0DPA2 414 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 ZNF10P21506 573 aaPredicted RBP4.92□□□□□ -1.62
LIMA1-212ENST00000552491 FCARP24071 287 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 MPGP29372 298 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 FAUP35544 74 aaKnown RBP4.92□□□□□ -1.62
LIMA1-212ENST00000552491 ARHGDIBP52566 201 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 PPP1CAP62136 330 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 RPS4XP62701 263 aaKnown RBP4.92□□□□□ -1.62
LIMA1-212ENST00000552491 SORDQ00796 357 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 SGCGQ13326 291 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 ALKBH1Q13686 389 aaKnown RBP4.92□□□□□ -1.62
LIMA1-212ENST00000552491 GK2Q14410 553 aaPredicted RBP4.92□□□□□ -1.62
LIMA1-212ENST00000552491 UBXN2BQ14CS0 331 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 RBMS2Q15434 407 aaKnown RBP4.92□□□□□ -1.62
LIMA1-212ENST00000552491 ETFDHQ16134 617 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 Q499Y3 187 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 FAM74A1Q5RGS3 127 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 LY6G6FQ5SQ64 297 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 XP32Q5T750 250 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 SLC6A19Q695T7 634 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 ULK3Q6PHR2 472 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 C17orf107Q6ZR85 190 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 CA13Q8N1Q1 262 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 RCBTB1Q8NDN9 531 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 OR51D1Q8NGF3 324 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 OR4C3Q8NH37 302 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 ATOH1Q92858 354 aaPredicted RBP4.92□□□□□ -1.62
LIMA1-212ENST00000552491 CCDC74AQ96AQ1 378 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 SLC22A18Q96BI1 424 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 C3orf49Q96BT1 292 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 SCARF2Q96GP6 870 aaPredicted RBP4.92□□□□□ -1.62
LIMA1-212ENST00000552491 MOGAT1Q96PD6 335 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 LMF1Q96S06 567 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 AMELYQ99218 206 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 PBX4Q9BYU1 374 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 SLITRK2Q9H156 845 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 TCF7L1Q9HCS4 588 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 RXFP3Q9NSD7 469 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 MED11Q9P086 117 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 COL4A2P08572 1712 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 OR6C74A6NCV1 312 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 FAM74A7A6NL05 159 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 F5H5P2 479 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 BLOC1S5-TXNDC5H3BN57 136 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 DNASE2O00115 360 aaPredicted RBP4.92□□□□□ -1.62
LIMA1-212ENST00000552491 SMAD9O15198 467 aaKnown RBP4.92□□□□□ -1.62
LIMA1-212ENST00000552491 OIP5O43482 229 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 CTAG2O75638 210 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 RBBP9O75884 186 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 RASGRP1O95267 797 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 WDPCPO95876 746 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 CD3DP04234 171 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 F13BP05160 661 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 ITGA5P08648 1049 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 TACSTD2P09758 323 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 IFI6P09912 130 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 C5AR1P21730 350 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 ACHEP22303 614 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 MAPK3P27361 379 aaPredicted RBP4.92□□□□□ -1.62
LIMA1-212ENST00000552491 TPMTP51580 245 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 GMFBP60983 142 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 RPS21P63220 83 aaKnown RBP4.92□□□□□ -1.62
LIMA1-212ENST00000552491 GRM7Q14831 915 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 ISXQ2M1V0 245 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 FAM74A3Q4VXF1 159 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 ENPP7Q6UWV6 458 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 LRRC69Q6ZNQ3 347 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 ABHD13Q7L211 337 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 FAM122BQ7Z309 247 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 CDH26Q8IXH8 852 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 PDZD9Q8IXQ8 264 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 PRSS35Q8N3Z0 413 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 LRRC75AQ8NAA5 344 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 OR8S1Q8NH09 359 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 OR5AK2Q8NH90 309 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 DUSP19Q8WTR2 217 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 PPP1R14AQ96A00 147 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 OR2M4Q96R27 311 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 PLA2G2FQ9BZM2 168 aa4.92□□□□□ -1.62
LIMA1-212ENST00000552491 TWSG1Q9GZX9 223 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms