RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ZNF14P17017 642 aaPredicted RBP4.53□□□□□ -1.68
HOXB3-213ENST00000552000 MAKP20794 623 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 MATN1P21941 496 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 PRPH2P23942 346 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 CXCR1P25024 350 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 LSP1P33241 339 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 PHBP35232 272 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 PTDSS1P48651 473 aaKnown RBP4.53□□□□□ -1.68
HOXB3-213ENST00000552000 SELENOVP59797 346 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 KCNJ10P78508 379 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 SRSF3P84103 164 aaKnown RBP4.53□□□□□ -1.68
HOXB3-213ENST00000552000 GLO1Q04760 184 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 HNRNPA0Q13151 305 aaKnown RBP4.53□□□□□ -1.68
HOXB3-213ENST00000552000 HLXQ14774 488 aaPredicted RBP4.53□□□□□ -1.68
HOXB3-213ENST00000552000 KRT72Q14CN4 511 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 FAM189A2Q15884 450 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 GSG1Q2KHT4 349 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 VMACQ2NL98 169 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 HFEQ30201 348 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 PCGF3Q3KNV8 242 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 ARHGAP11BQ3KRB8 267 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 LSM12Q3MHD2 195 aaKnown RBP4.53□□□□□ -1.68
HOXB3-213ENST00000552000 MMEL1Q495T6 779 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 GALNTL6Q49A17 601 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 RFTN2Q52LD8 501 aaPredicted RBP4.53□□□□□ -1.68
HOXB3-213ENST00000552000 VAX1Q5SQQ9 334 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 ZNF362Q5T0B9 420 aaPredicted RBP4.53□□□□□ -1.68
HOXB3-213ENST00000552000 LIPMQ5VYY2 423 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 TYW3Q6IPR3 259 aaKnown RBP4.53□□□□□ -1.68
HOXB3-213ENST00000552000 RGS7BPQ6MZT1 257 aaPredicted RBP4.53□□□□□ -1.68
HOXB3-213ENST00000552000 FIP1L1Q6UN15 594 aaKnown RBP4.53□□□□□ -1.68
HOXB3-213ENST00000552000 FRRS1Q6ZNA5 592 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 NLRC3Q7RTR2 1065 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 HDXQ7Z353 690 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 C6orf120Q7Z4R8 191 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 CCDC36Q8IYA8 594 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 SYT8Q8NBV8 401 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 VPS37AQ8NEZ2 397 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 OR52E2Q8NGJ4 325 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 PSMA8Q8TAA3 256 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 MRAPQ8TCY5 172 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 CCL17Q92583 94 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 MOAP1Q96BY2 351 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 ZG16BQ96DA0 208 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 TRIM44Q96DX7 344 aaPredicted RBP4.53□□□□□ -1.68
HOXB3-213ENST00000552000 MTERF3Q96E29 417 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 SLC35G5Q96KT7 338 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 MRI1Q9BV20 369 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 WNT10AQ9GZT5 417 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 OR51B6Q9H340 312 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 MARCH7Q9H992 704 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 SAP30LQ9HAJ7 183 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 EXOSC3Q9NQT5 275 aaKnown RBP4.53□□□□□ -1.68
HOXB3-213ENST00000552000 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.53□□□□□ -1.68
HOXB3-213ENST00000552000 DECR2Q9NUI1 292 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 EXD2Q9NVH0 621 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 C1RLQ9NZP8 487 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 SEC14L4Q9UDX3 406 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 GIMAP2Q9UG22 337 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 RASD1Q9Y272 281 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 UTP11Q9Y3A2 253 aaKnown RBP4.53□□□□□ -1.68
HOXB3-213ENST00000552000 FIS1Q9Y3D6 152 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 WDR45Q9Y484 360 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 SAR1BQ9Y6B6 198 aa4.53□□□□□ -1.68
HOXB3-213ENST00000552000 DNAH1Q9P2D7 4330 aa4.53□□□□□ -1.69
HOXB3-213ENST00000552000 DSPPQ9NZW4 1301 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 RNF103-CHMP3A0A140T963 221 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 CFAP73A6NFT4 308 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 DUXAA6NLW8 204 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 ZNF99A8MXY4 864 aaPredicted RBP4.52□□□□□ -1.69
HOXB3-213ENST00000552000 M0R3G1 203 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 PRODHO43272 600 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 NDUFA7O95182 113 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 RAB36O95755 333 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 NGFP01138 241 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 IGHMP01871 453 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 SNRPAP09012 282 aaKnown RBP4.52□□□□□ -1.69
HOXB3-213ENST00000552000 LINC00032P0C843 101 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 OR8G3PP0DMU2 310 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 PF4V1P10720 104 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 UROSP10746 265 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 PNMTP11086 282 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 NEFHP12036 1026 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 B4GALT1P15291 398 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 ZNF43P17038 809 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 AQP5P55064 265 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 KLF3P57682 345 aaPredicted RBP4.52□□□□□ -1.69
HOXB3-213ENST00000552000 ERVS71-1P61550 626 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 HBA1P69905 142 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 C2orf54Q08AI8 447 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 FUT5Q11128 374 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 C1DQ13901 141 aaKnown RBP4.52□□□□□ -1.69
HOXB3-213ENST00000552000 GALEQ14376 348 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 RAB39AQ14964 217 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 TSTQ16762 297 aaKnown RBP4.52□□□□□ -1.69
HOXB3-213ENST00000552000 C2orf68Q2NKX9 166 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 DEFB112Q30KQ8 113 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 CFAP157Q5JU67 520 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 PHYHD1Q5SRE7 291 aa4.52□□□□□ -1.69
HOXB3-213ENST00000552000 KPRPQ5T749 579 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms