RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 CHATP28329 748 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 GLRXP35754 106 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 ARR3P36575 388 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 TGFBR2P37173 567 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 KIR2DS4P43632 304 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 IER3P46695 156 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF41P51814 821 aaPredicted RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 PSMD4P55036 377 aaKnown RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 SH3BGRP55822 239 aaPredicted RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 GPX6P59796 221 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 UBE2HP62256 183 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 RPS23P62266 143 aaKnown RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 CRADDP78560 199 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 LCN2P80188 198 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 BST1Q10588 318 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 SELENBP1Q13228 472 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 HNF4GQ14541 408 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 EXOSC7Q15024 291 aaKnown RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 TGFBIQ15582 683 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 TRADDQ15628 312 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 CCNG2Q16589 344 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 PDK4Q16654 411 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 TBRG1Q3YBR2 411 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 TMEM155Q4W5P6 130 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 TRMT12Q53H54 448 aaKnown RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF311Q5JNZ3 666 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 LCE1CQ5T751 118 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 LGSNQ5TDP6 509 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 C6orf163Q5TEZ5 329 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 AP1ARQ63HQ0 302 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF774Q6NX45 483 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 C3orf33Q6P1S2 294 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 MED27Q6P2C8 311 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 KLHL24Q6TFL4 600 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 LRRN1Q6UXK5 716 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 C4orf22Q6V702 233 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 SLC16A12Q6ZSM3 486 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 Q6ZTK2 550 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 LRRC70Q7Z2Q7 622 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 RNF144BQ7Z419 303 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 SPATA21Q7Z572 469 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 ABHD12BQ7Z5M8 362 aaPredicted RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 MTERF4Q7Z6M4 381 aaKnown RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 ADAMTSL2Q86TH1 951 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 MARCH3Q86UD3 253 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 NDUFA11Q86Y39 141 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 CCDC50Q8IVM0 306 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 CCDC36Q8IYA8 594 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF100Q8IYN0 542 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 Q8N2B8 174 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 OR2L13Q8N349 312 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 TCAIMQ8N3R3 496 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 POMGNT2Q8NAT1 580 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 OR4N2Q8NGD1 307 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 OR52R1Q8NGF1 315 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 OR52E2Q8NGJ4 325 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 OR4C3Q8NH37 302 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 HUS1BQ8NHY5 278 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 ADAMTS16Q8TE57 1224 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 DOK4Q8TEW6 326 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 ABHD5Q8WTS1 349 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 UBTD2Q8WUN7 234 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 C10orf82Q8WW14 230 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 CCT6BQ92526 530 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 RAB1CQ92928 201 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 EFHD2Q96C19 240 aaPredicted RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 CNRIP1Q96F85 164 aaPredicted RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF75AQ96N20 296 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 BBS4Q96RK4 519 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 KCNS3Q9BQ31 491 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 KLHDC3Q9BQ90 382 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 CENPKQ9BS16 269 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 ANP32EQ9BTT0 268 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 ABHD14AQ9BUJ0 271 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 SORBS1Q9BX66 1292 aaKnown RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 FRMD8P1Q9BZ68 369 aaPredicted RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 MRPL37Q9BZE1 423 aaKnown RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 GPR61Q9BZJ8 451 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 TSGA10Q9BZW7 698 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 OR51B5Q9H339 312 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 CENPHQ9H3R5 247 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 TPK1Q9H3S4 243 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 NARFLQ9H6Q4 476 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 RANBP3Q9H6Z4 567 aaPredicted RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 ANKZF1Q9H8Y5 726 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 MARCH7Q9H992 704 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 CNOT10Q9H9A5 744 aaKnown RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 EDA2RQ9HAV5 297 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 PATZ1Q9HBE1 687 aaKnown RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 NOX3Q9HBY0 568 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 TMEM165Q9HC07 324 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 SDF2L1Q9HCN8 221 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 DYNLRB1Q9NP97 96 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 KCNK9Q9NPC2 374 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 A4GALTQ9NPC4 353 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 TAS2R9Q9NYW1 312 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 FLRT3Q9NZU0 649 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 VPREB3Q9UKI3 123 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF346Q9UL40 294 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms