RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 CXXC5Q7LFL8 322 aaKnown RBP12.55□□□□□ -0.4
CACNB3-216ENST00000550391 ATCAYQ86WG3 371 aa12.55□□□□□ -0.4
CACNB3-216ENST00000550391 ZNF786Q8N393 782 aa12.55□□□□□ -0.4
CACNB3-216ENST00000550391 SDR9C7Q8NEX9 313 aa12.55□□□□□ -0.4
CACNB3-216ENST00000550391 OR5M9Q8NGP3 310 aa12.55□□□□□ -0.4
CACNB3-216ENST00000550391 OR6X1Q8NH79 312 aa12.55□□□□□ -0.4
CACNB3-216ENST00000550391 FNDC9Q8TBE3 224 aa12.55□□□□□ -0.4
CACNB3-216ENST00000550391 OTULINQ96BN8 352 aa12.55□□□□□ -0.4
CACNB3-216ENST00000550391 ADAD1Q96M93 576 aaKnown RBP12.55□□□□□ -0.4
CACNB3-216ENST00000550391 ZNF582Q96NG8 517 aaPredicted RBP12.55□□□□□ -0.4
CACNB3-216ENST00000550391 SNX18Q96RF0 628 aa12.55□□□□□ -0.4
CACNB3-216ENST00000550391 NMNAT3Q96T66 252 aa12.55□□□□□ -0.4
CACNB3-216ENST00000550391 DDOQ99489 341 aa12.55□□□□□ -0.4
CACNB3-216ENST00000550391 HINT3Q9NQE9 182 aaKnown RBP12.55□□□□□ -0.4
CACNB3-216ENST00000550391 MED29Q9NX70 200 aa12.55□□□□□ -0.4
CACNB3-216ENST00000550391 DNAJC27Q9NZQ0 273 aa12.55□□□□□ -0.4
CACNB3-216ENST00000550391 H2AFY2Q9P0M6 372 aaPredicted RBP12.55□□□□□ -0.4
CACNB3-216ENST00000550391 KLHL9Q9P2J3 617 aa12.55□□□□□ -0.4
CACNB3-216ENST00000550391 CLCF1Q9UBD9 225 aa12.55□□□□□ -0.4
CACNB3-216ENST00000550391 ING1Q9UK53 422 aaPredicted RBP12.55□□□□□ -0.4
CACNB3-216ENST00000550391 CENPEQ02224 2701 aa12.55□□□□□ -0.4
CACNB3-216ENST00000550391 GTF3C1Q12789 2109 aa12.55□□□□□ -0.4
CACNB3-216ENST00000550391 IGKV3D-15A0A087WSY6 115 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 PRSS37A4D1T9 235 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 SLC35F4A4IF30 521 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 OR6C68A6NDL8 312 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 FAM183AA6NL82 134 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 SNTNA6NMZ2 147 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 TTLL8A6PVC2 850 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 KDM4EB2RXH2 506 aaPredicted RBP12.54□□□□□ -0.4
CACNB3-216ENST00000550391 AKAP8O43823 692 aaKnown RBP12.54□□□□□ -0.4
CACNB3-216ENST00000550391 ENTPD6O75354 484 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 TRMUO75648 421 aaKnown RBP12.54□□□□□ -0.4
CACNB3-216ENST00000550391 AQP8O94778 261 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 FCGR2AP12318 317 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 FMO3P31513 532 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 SLC25A1P53007 311 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 CLDN17P56750 224 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 NXNL2Q5VZ03 156 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 ZNF585AQ6P3V2 769 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 PLXDC2Q6UX71 529 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 GFRALQ6UXV0 394 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 P4HA3Q7Z4N8 544 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 GID4Q8IVV7 300 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 WDFY1Q8IWB7 410 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 MCEMP1Q8IX19 187 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 ZIC4Q8N9L1 334 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 CYB561A3Q8NBI2 242 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 BPIFB6Q8NFQ5 453 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 ABHD3Q8WU67 409 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 PTP4A1Q93096 173 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 RFKQ969G6 155 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 EMC6Q9BV81 110 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 RNF122Q9H9V4 155 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 CALHM2Q9HA72 323 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 VSX1Q9NZR4 365 aaPredicted RBP12.54□□□□□ -0.4
CACNB3-216ENST00000550391 EMC3Q9P0I2 261 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 MYRFQ9Y2G1 1151 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 FLVCR1Q9Y5Y0 555 aa12.54□□□□□ -0.4
CACNB3-216ENST00000550391 ZNF724A8MTY0 619 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 CENPBD1B2RD01 187 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 SLC1A7O00341 560 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 PRODHO43272 600 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 WDR1O75083 606 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 IGHG1P01857 330 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 TPOP07202 933 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 HOXD4P09016 255 aaPredicted RBP12.53□□□□□ -0.4
CACNB3-216ENST00000550391 CCDC159P0C7I6 412 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 GABRA1P14867 456 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 PTGER4P35408 488 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 RUNX1T1Q06455 604 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 SMN1Q16637 294 aaKnown RBP12.53□□□□□ -0.4
CACNB3-216ENST00000550391 ACSF3Q4G176 576 aaPredicted RBP12.53□□□□□ -0.4
CACNB3-216ENST00000550391 BCDIN3DQ7Z5W3 292 aaKnown RBP12.53□□□□□ -0.4
CACNB3-216ENST00000550391 FAM57AQ8TBR7 257 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 ZNF566Q969W8 418 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 SLC25A44Q96H78 314 aaPredicted RBP12.53□□□□□ -0.4
CACNB3-216ENST00000550391 ZNF385AQ96PM9 386 aaKnown RBP12.53□□□□□ -0.4
CACNB3-216ENST00000550391 TRIB1Q96RU8 372 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 ALG12Q9BV10 488 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 NMNAT2Q9BZQ4 307 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 MED20Q9H944 212 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 BCO1Q9HAY6 547 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 GP6Q9HCN6 339 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 GLRX2Q9NS18 164 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 PLCXD1Q9NUJ7 323 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 SCN3BQ9NY72 215 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 RCE1Q9Y256 329 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 TPRKBQ9Y3C4 175 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 RPL36Q9Y3U8 105 aaKnown RBP12.53□□□□□ -0.4
CACNB3-216ENST00000550391 SVILO95425 2214 aa12.53□□□□□ -0.4
CACNB3-216ENST00000550391 CSMD1Q96PZ7 3565 aa12.52□□□□□ -0.4
CACNB3-216ENST00000550391 SLC22A23A1A5C7 686 aa12.52□□□□□ -0.41
CACNB3-216ENST00000550391 CD8B2A6NJW9 211 aa12.52□□□□□ -0.41
CACNB3-216ENST00000550391 FAM20BO75063 409 aa12.52□□□□□ -0.41
CACNB3-216ENST00000550391 SMNDC1O75940 238 aaKnown RBP eCLIP12.52□□□□□ -0.41
CACNB3-216ENST00000550391 AGFG2O95081 481 aa12.52□□□□□ -0.41
CACNB3-216ENST00000550391 TNFAIP8O95379 198 aa12.52□□□□□ -0.41
CACNB3-216ENST00000550391 TGM6O95932 706 aa12.52□□□□□ -0.41
CACNB3-216ENST00000550391 YES1P07947 543 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms