RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 RBMY1DP0C7P1 496 aaKnown RBP4.33□□□□□ -1.72
HCFC2-204ENST00000550335 RBMY1A1P0DJD3 496 aaKnown RBP4.33□□□□□ -1.72
HCFC2-204ENST00000550335 CXCR2P25025 360 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 MT3P25713 68 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 SLC26A2P50443 739 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 DIO3P55073 304 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 CSNK1G2P78368 415 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 PDIA2Q13087 525 aaKnown RBP4.33□□□□□ -1.72
HCFC2-204ENST00000550335 GNMTQ14749 295 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 CHRNA6Q15825 494 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 PRR4Q16378 134 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 C15orf32Q32M92 178 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 ZNF836Q6ZNA1 936 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 FAM220AQ7Z4H9 259 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 ZNF100Q8IYN0 542 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 PRR22Q8IZ63 422 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.33□□□□□ -1.72
HCFC2-204ENST00000550335 B3GNT7Q8NFL0 401 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 OR6C4Q8NGE1 309 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 OR13F1Q8NGS4 319 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 OR9A1PQ8NGU1 263 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 OR2G2Q8NGZ5 317 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 PLPPR1Q8TBJ4 325 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 FAM222BQ8WU58 562 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 PEX13Q92968 403 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 SLC38A4Q969I6 547 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 NAF1Q96HR8 494 aaKnown RBP4.33□□□□□ -1.72
HCFC2-204ENST00000550335 KIR2DL4Q99706 377 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 HES7Q9BYE0 225 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 KRTAP17-1Q9BYP8 105 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 POLR2J2Q9GZM3 115 aaKnown RBP4.33□□□□□ -1.72
HCFC2-204ENST00000550335 IQCGQ9H095 443 aaKnown RBP4.33□□□□□ -1.72
HCFC2-204ENST00000550335 POLR2J3Q9H1A7 115 aaKnown RBP4.33□□□□□ -1.72
HCFC2-204ENST00000550335 PSME2Q9UL46 239 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 VANGL2Q9ULK5 521 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 PACSIN2Q9UNF0 486 aaPredicted RBP4.33□□□□□ -1.72
HCFC2-204ENST00000550335 UGT2A1Q9Y4X1 527 aa4.33□□□□□ -1.72
HCFC2-204ENST00000550335 NHSQ6T4R5 1651 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 RREB1Q92766 1687 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 MEGF6O75095 1541 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 IGHV1OR15-1A0A075B7D0 117 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 EIF3HO15372 352 aaKnown RBP eCLIP4.32□□□□□ -1.72
HCFC2-204ENST00000550335 LYPLA1O75608 230 aaPredicted RBP4.32□□□□□ -1.72
HCFC2-204ENST00000550335 GAS8-AS1O95177 125 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 C1orf105O95561 183 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 STAG3L3P0CL85 134 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 OR8G3PP0DMU2 310 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 GATA1P15976 413 aaPredicted RBP4.32□□□□□ -1.72
HCFC2-204ENST00000550335 GTF2E2P29084 291 aaKnown RBP4.32□□□□□ -1.72
HCFC2-204ENST00000550335 KLK7P49862 253 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 TLE4Q04727 773 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 OLFML2AQ68BL7 652 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 UNQ9370/PRO34162Q6UXP9 181 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 CCDC73Q6ZRK6 1079 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 TMCO2Q7Z6W1 182 aaPredicted RBP4.32□□□□□ -1.72
HCFC2-204ENST00000550335 C17orf82Q86X59 251 aaPredicted RBP4.32□□□□□ -1.72
HCFC2-204ENST00000550335 CD177Q8N6Q3 437 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 FAM184AQ8NB25 1140 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 MAPK1IP1LQ8NDC0 245 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 OR52I1Q8NGK6 324 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 CCDC126Q96EE4 140 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 C1orf147Q96MC9 270 aaPredicted RBP4.32□□□□□ -1.72
HCFC2-204ENST00000550335 ZNF578Q96N58 590 aaPredicted RBP4.32□□□□□ -1.72
HCFC2-204ENST00000550335 OR8B4Q96RC9 309 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 ZNF184Q99676 751 aaPredicted RBP4.32□□□□□ -1.72
HCFC2-204ENST00000550335 TSG101Q99816 390 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 DEFB126Q9BYW3 111 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 GBA3Q9H227 469 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 GEMIN7Q9H840 131 aaKnown RBP4.32□□□□□ -1.72
HCFC2-204ENST00000550335 ZNF275Q9NSD4 429 aaPredicted RBP4.32□□□□□ -1.72
HCFC2-204ENST00000550335 SAMSN1Q9NSI8 373 aaKnown RBP4.32□□□□□ -1.72
HCFC2-204ENST00000550335 GIN1Q9NXP7 522 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 SBF2Q86WG5 1849 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 LRP5O75197 1615 aa4.32□□□□□ -1.72
HCFC2-204ENST00000550335 EP400Q96L91 3159 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 CHD4Q14839 1912 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 PHLPP2Q6ZVD8 1323 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 MAP2P11137 1827 aaKnown RBP4.31□□□□□ -1.72
HCFC2-204ENST00000550335 IGHV1OR21-1A0A087WYE8 117 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 IGHV7-81A0A0B4J1V7 117 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 LRRIQ3A6PVS8 624 aaPredicted RBP4.31□□□□□ -1.72
HCFC2-204ENST00000550335 SUPT3HB4E1H0 165 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 H0YIV9 168 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 GATA2P23769 480 aaPredicted RBP4.31□□□□□ -1.72
HCFC2-204ENST00000550335 RFX3P48380 749 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 VEGFCP49767 419 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 DGUOKQ16854 277 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 SASS6Q6UVJ0 657 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 TMIGD1Q6UXZ0 262 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 BHLHA9Q7RTU4 235 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 MARCH9Q86YJ5 346 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 FBXO16Q8IX29 292 aaPredicted RBP4.31□□□□□ -1.72
HCFC2-204ENST00000550335 ZNF740Q8NDX6 193 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 OR7G2Q8NG99 324 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 CHCHD10Q8WYQ3 142 aaPredicted RBP4.31□□□□□ -1.72
HCFC2-204ENST00000550335 SORT1Q99523 831 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 ATP5SQ99766 215 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 MFFQ9GZY8 342 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 ILKAPQ9H0C8 392 aaPredicted RBP4.31□□□□□ -1.72
HCFC2-204ENST00000550335 CD274Q9NZQ7 290 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms