RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 SIRPAP78324 504 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 RIN1Q13671 783 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 MFSD13AQ14CX5 517 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 PON3Q15166 354 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 MEP1BQ16820 701 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 NKPD1Q17RQ9 610 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 AKIRIN2Q53H80 203 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 CFAP77Q6ZQR2 320 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 C17orf107Q6ZR85 190 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 MDGA2Q7Z553 956 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 ZNF321PQ8N8H1 164 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 OR5M1Q8NGP8 315 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 OR56B4Q8NH76 319 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 FAM46BQ96A09 425 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 ZDHHC12Q96GR4 267 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 AHCYL2Q96HN2 611 aaKnown RBP10.09□□□□□ -0.79
LINC00661-204ENST00000549354 ADAD1Q96M93 576 aaKnown RBP10.09□□□□□ -0.79
LINC00661-204ENST00000549354 UBL7Q96S82 380 aaPredicted RBP10.09□□□□□ -0.79
LINC00661-204ENST00000549354 ARL6Q9H0F7 186 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 PRDM6Q9NQX0 595 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 SLC35A3Q9Y2D2 325 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 RNF215Q9Y6U7 377 aa10.09□□□□□ -0.79
LINC00661-204ENST00000549354 ICE1Q9Y2F5 2266 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 LINC00862A6NCI5 91 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 DCTN6O00399 190 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 SPDEFO95238 335 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 PSMB1P20618 241 aaKnown RBP10.08□□□□□ -0.8
LINC00661-204ENST00000549354 S1PR1P21453 382 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 GPR3P46089 330 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 CCR9P51686 369 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 SHBQ15464 509 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 COL28A1Q2UY09 1125 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 C1orf189Q5VU69 101 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 BTN2A1Q7KYR7 527 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 SLC25A45Q8N413 288 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 DEFB123Q8N688 67 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 RELL2Q8NC24 303 aaPredicted RBP10.08□□□□□ -0.8
LINC00661-204ENST00000549354 SYNPRQ8TBG9 265 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 TRAF4Q9BUZ4 470 aaPredicted RBP10.08□□□□□ -0.8
LINC00661-204ENST00000549354 MED17Q9NVC6 651 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 SCP2D1Q9UJQ7 156 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 PCDHGA5Q9Y5G8 931 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 CLDN16Q9Y5I7 305 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 TNRC6BQ9UPQ9 1833 aaKnown RBP10.08□□□□□ -0.8
LINC00661-204ENST00000549354 IGHV5-51A0A0C4DH38 117 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 A0A1B0GVI7 797 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 DCDC2BA2VCK2 349 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 OR6C68A6NDL8 312 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 H3BUI4 141 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 SULT1A3P0DMM9 295 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 SULT1A4P0DMN0 295 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 SRMP19623 302 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 AKR1C2P52895 323 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 GBX2P52951 348 aaPredicted RBP10.08□□□□□ -0.8
LINC00661-204ENST00000549354 AKR1C1Q04828 323 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 TMEM44Q2T9K0 475 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 TMEM69Q5SWH9 247 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 DMKNQ6E0U4 476 aaPredicted RBP10.08□□□□□ -0.8
LINC00661-204ENST00000549354 GPALPP1Q8IXQ4 340 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 ZNF595Q8IYB9 648 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 ZNF676Q8N7Q3 588 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 CDRT4Q8N9R6 151 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 ADOQ96SZ5 270 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 ZNF350Q9GZX5 532 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 TAS2R10Q9NYW0 307 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 CDV3Q9UKY7 258 aaKnown RBP10.08□□□□□ -0.8
LINC00661-204ENST00000549354 THADAQ6YHU6 1953 aa10.08□□□□□ -0.8
LINC00661-204ENST00000549354 CTNSO60931 367 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 PLATP00750 562 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 IGKV1D-16P01601 117 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 THBS1P07996 1170 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 RNH1P13489 461 aaKnown RBP10.07□□□□□ -0.8
LINC00661-204ENST00000549354 GALNSP34059 522 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 NRG3P56975 720 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 ACSM1Q08AH1 577 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 DUSP8Q13202 625 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 C2orf68Q2NKX9 166 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 SCGB2B2Q4G0G5 96 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 CCDC157Q569K6 752 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 WDR5BQ86VZ2 330 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 STPG2Q8N412 459 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 PLPP7Q8NBV4 271 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 GPR119Q8TDV5 335 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 ANKRD19PQ9H560 264 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 PRMT8Q9NR22 394 aaPredicted RBP10.07□□□□□ -0.8
LINC00661-204ENST00000549354 DIABLOQ9NR28 239 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 POLE3Q9NRF9 147 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 DHCR7Q9UBM7 475 aaKnown RBP10.07□□□□□ -0.8
LINC00661-204ENST00000549354 PCNX3Q9H6A9 2034 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 POLEQ07864 2286 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 IGHV1OR21-1A0A087WYE8 117 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 G3V3Q6 166 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 H0YIG0 161 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 PIN1P1O15428 100 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 WISP1O95388 367 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 AK1P00568 194 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 PTBP1P26599 531 aaKnown RBP eCLIP10.07□□□□□ -0.8
LINC00661-204ENST00000549354 PTH2RP49190 550 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 MMP15P51511 669 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 GFERP55789 205 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms