RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 CYLC2Q14093 348 aaPredicted RBP5.8□□□□□ -1.48
SCAF11-211ENST00000547950 EFNB3Q15768 340 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 NPTX1Q15818 432 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 TRMT5Q32P41 509 aaKnown RBP5.8□□□□□ -1.48
SCAF11-211ENST00000547950 METTL21CQ5VZV1 264 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 ZNF613Q6PF04 617 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 NHLRC1Q6VVB1 395 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 WDR88Q6ZMY6 472 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 CXXC5Q7LFL8 322 aaKnown RBP5.8□□□□□ -1.48
SCAF11-211ENST00000547950 PATL1Q86TB9 770 aaKnown RBP5.8□□□□□ -1.48
SCAF11-211ENST00000547950 ARIH2OSQ8N7S6 290 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 ADPRHL1Q8NDY3 354 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 NUP37Q8NFH4 326 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 IL17RDQ8NFM7 739 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 OR4D11Q8NGI4 311 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 OR5J2Q8NH18 312 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 ADAMTS16Q8TE57 1224 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 LRR1Q96L50 414 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 DOK1Q99704 481 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 TMEM43Q9BTV4 400 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 ULBP2Q9BZM5 246 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 SHARPINQ9H0F6 387 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 ZNF385DQ9H6B1 395 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 KAT8Q9H7Z6 458 aaKnown RBP5.8□□□□□ -1.48
SCAF11-211ENST00000547950 CHODLQ9H9P2 273 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 ARGLU1Q9NWB6 273 aaPredicted RBP5.8□□□□□ -1.48
SCAF11-211ENST00000547950 B3GNT2Q9NY97 397 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 TAS2R5Q9NYW4 299 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 SLC7A7Q9UM01 511 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 SH3GLB1Q9Y371 365 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 CMAHPQ9Y471 501 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 SPEF1Q9Y4P9 236 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 HEATR5AQ86XA9 2040 aa5.8□□□□□ -1.48
SCAF11-211ENST00000547950 TLN2Q9Y4G6 2542 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 FREM1Q5H8C1 2179 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 IGHV4-61A0A0C4DH41 118 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 LOC100653049A0A140TA62 436 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 TMEM129A0AVI4 362 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 LRP5LA4QPB2 252 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 TRAPPC13A5PLN9 417 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 VWC2LB2RUY7 222 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 LYNX1G3V0Z9 82 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 BLOC1S5-TXNDC5H3BN57 136 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 NDUFS8O00217 210 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 FBP2O00757 339 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 CHP2O43745 196 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 LMX1BO60663 402 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 SHOX2O60902 331 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-211ENST00000547950 FZD7O75084 574 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 KRT34O76011 436 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 PDE5AO76074 875 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 LYPD3O95274 346 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 TGFAP01135 160 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 ERCC1P07992 297 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-211ENST00000547950 FAM157CP0CG43 387 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 LYNX1P0DP58 116 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 UMPSP11172 480 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 APEHP13798 732 aaKnown RBP5.79□□□□□ -1.48
SCAF11-211ENST00000547950 DAOP14920 347 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 ZNF16P17020 682 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-211ENST00000547950 TCN1P20061 433 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-211ENST00000547950 CD247P20963 164 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 GIPRP48546 466 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 GZMKP49863 264 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 PPOXP50336 477 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 SNTB2Q13425 540 aaKnown RBP5.79□□□□□ -1.48
SCAF11-211ENST00000547950 RAB39AQ14964 217 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 ZNF74Q16587 644 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 GSG1Q2KHT4 349 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 VMACQ2NL98 169 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 MMEL1Q495T6 779 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 RABL3Q5HYI8 236 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 INTS11Q5TA45 600 aaKnown RBP5.79□□□□□ -1.48
SCAF11-211ENST00000547950 GKAP1Q5VSY0 366 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-211ENST00000547950 NANOGP8Q6NSW7 305 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 IL17RELQ6ZVW7 336 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 SLC35D2Q76EJ3 337 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 TSPYL5Q86VY4 417 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-211ENST00000547950 SNX32Q86XE0 403 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 SLC30A8Q8IWU4 369 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 SKA3Q8IX90 412 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 CDK20Q8IZL9 346 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 ZNF540Q8NDQ6 660 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 OR6X1Q8NH79 312 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 TSPEARQ8WU66 669 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 ZNF566Q969W8 418 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 TAMM41Q96BW9 452 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 MSI2Q96DH6 328 aaKnown RBP5.79□□□□□ -1.48
SCAF11-211ENST00000547950 FOXB1Q99853 325 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 SH3GL1Q99961 368 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 SH3GL3Q99963 347 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 ECSITQ9BQ95 431 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 TMEM120AQ9BXJ8 343 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 TPK1Q9H3S4 243 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 ZNF442Q9H7R0 627 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 NANOGQ9H9S0 305 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 NOX3Q9HBY0 568 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 DYNLRB1Q9NP97 96 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 NANSQ9NR45 359 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 DUSP13Q9UII6 198 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms