RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 RNF220Q5VTB9 566 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 IFT20Q8IY31 132 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 LRRC34Q8IZ02 419 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 PAQR4Q8N4S7 273 aaPredicted RBP10.81□□□□□ -0.68
SCAF11-208ENST00000546534 SYNPRQ8TBG9 265 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 EPS8L3Q8TE67 593 aaKnown RBP10.81□□□□□ -0.68
SCAF11-208ENST00000546534 POP5Q969H6 163 aaKnown RBP10.81□□□□□ -0.68
SCAF11-208ENST00000546534 APOPT1Q96IL0 206 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 TXNDC15Q96J42 360 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 FOXB1Q99853 325 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 OR51B6Q9H340 312 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 B3GAT2Q9NPZ5 323 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 DECR2Q9NUI1 292 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 MKS1Q9NXB0 559 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 SLCO1C1Q9NYB5 712 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 PDP1Q9P0J1 537 aaPredicted RBP10.81□□□□□ -0.68
SCAF11-208ENST00000546534 BTNL2Q9UIR0 455 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 LEF1Q9UJU2 399 aaPredicted RBP10.81□□□□□ -0.68
SCAF11-208ENST00000546534 FBXL3Q9UKT7 428 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 PPIAL4EA0A075B759 164 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 PPIAL4CA0A0B4J2A2 164 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 E9PBE3 544 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 PPIAL4DF5H284 164 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 CLDN34H7C241 214 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 OR2T1O43869 369 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 ZNF500O60304 480 aaPredicted RBP10.8□□□□□ -0.68
SCAF11-208ENST00000546534 PPIAL4FP0DN26 164 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 CCL2P13500 99 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 MAKP20794 623 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 OMGP23515 440 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 CDKN2CP42773 168 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 ATP4BP51164 291 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 CAMK2DQ13557 499 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 SLC9A3R2Q15599 337 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 TSTQ16762 297 aaKnown RBP10.8□□□□□ -0.68
SCAF11-208ENST00000546534 DPY19L1Q2PZI1 675 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 NHLRC1Q6VVB1 395 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 ZNF621Q6ZSS3 439 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 UEVLDQ8IX04 471 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 SKA3Q8IX90 412 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 TRIML2Q8N7C3 387 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 GLB1L3Q8NCI6 653 aaPredicted RBP10.8□□□□□ -0.68
SCAF11-208ENST00000546534 MNS1Q8NEH6 495 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 OR6N1Q8NGY5 312 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 HSH2DQ96JZ2 352 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 PANX1Q96RD7 426 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 PKP2Q99959 881 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 SPATA9Q9BWV2 254 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 ULBP2Q9BZM5 246 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 SAP30LQ9HAJ7 183 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 MMP26Q9NRE1 261 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 UBAP1Q9NZ09 502 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 EGFL7Q9UHF1 273 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 AUP1Q9Y679 476 aa10.8□□□□□ -0.68
SCAF11-208ENST00000546534 IGKV1D-42A0A075B6H8 117 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 ISPDA4D126 451 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 FOXH1O75593 365 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 LCKP06239 509 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 BCHEP06276 602 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 OR8G3PP0DMU2 310 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 CLNS1AP54105 237 aaKnown RBP10.79□□□□□ -0.68
SCAF11-208ENST00000546534 RBBP4Q09028 425 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 LARS2Q15031 903 aaKnown RBP10.79□□□□□ -0.68
SCAF11-208ENST00000546534 RPS26P11Q5JNZ5 115 aaPredicted RBP10.79□□□□□ -0.68
SCAF11-208ENST00000546534 SNX32Q86XE0 403 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 ADPRHL1Q8NDY3 354 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 SLC30A7Q8NEW0 376 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 ZNF519Q8TB69 540 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 ST7LQ8TDW4 575 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 C11orf40Q8WZ69 217 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 CCL17Q92583 94 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 SLC38A4Q969I6 547 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 TMIGD2Q96BF3 282 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 TEX37Q96LM6 180 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 ZIM3Q96PE6 472 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 PPCSQ9HAB8 311 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 CALML5Q9NZT1 146 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 KLHL14Q9P2G3 628 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 P2RX2Q9UBL9 471 aa10.79□□□□□ -0.68
SCAF11-208ENST00000546534 PURGQ9UJV8 347 aaKnown RBP10.79□□□□□ -0.68
SCAF11-208ENST00000546534 TRAV36DV7A0A075B6V5 113 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 A0A087WUJ7 227 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 TRAPPC2LH3BP13 241 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 SPAG7O75391 227 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 ETFAP13804 333 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 NQO1P15559 274 aaKnown RBP10.78□□□□□ -0.68
SCAF11-208ENST00000546534 PCGF2P35227 344 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 MVDP53602 400 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 GLO1Q04760 184 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 ZNF154Q13106 437 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 C6orf89Q6UWU4 347 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 SPATC1Q76KD6 591 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 PIWIL3Q7Z3Z3 882 aaKnown RBP10.78□□□□□ -0.68
SCAF11-208ENST00000546534 NET1Q7Z628 596 aaPredicted RBP10.78□□□□□ -0.68
SCAF11-208ENST00000546534 MIER2Q8N344 545 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 SLC38A5Q8WUX1 472 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 TRIM44Q96DX7 344 aaPredicted RBP10.78□□□□□ -0.68
SCAF11-208ENST00000546534 ELMOD3Q96FG2 381 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 SLC41A3Q96GZ6 507 aa10.78□□□□□ -0.68
SCAF11-208ENST00000546534 ARMC7Q9H6L4 198 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms