RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 SLC38A5Q8WUX1 472 aa10.95□□□□□ -0.66
USP28-212ENST00000544750 LRRC58Q96CX6 371 aa10.95□□□□□ -0.66
USP28-212ENST00000544750 P2RX2Q9UBL9 471 aa10.95□□□□□ -0.66
USP28-212ENST00000544750 PRSS23O95084 383 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 AHSA1O95433 338 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 IGHV2-5P01817 119 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 VIMP08670 466 aaKnown RBP10.94□□□□□ -0.66
USP28-212ENST00000544750 TROVE2P10155 538 aaKnown RBP eCLIP10.94□□□□□ -0.66
USP28-212ENST00000544750 RPS5P46782 204 aaKnown RBP10.94□□□□□ -0.66
USP28-212ENST00000544750 COPZ1P61923 177 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 RPS23P62266 143 aaKnown RBP10.94□□□□□ -0.66
USP28-212ENST00000544750 FADDQ13158 208 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 TRMT5Q32P41 509 aaKnown RBP10.94□□□□□ -0.66
USP28-212ENST00000544750 ZNF311Q5JNZ3 666 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 AVPI1Q5T686 147 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 METTL21CQ5VZV1 264 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 ZNF584Q8IVC4 421 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 WDFY1Q8IWB7 410 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 PEX5LQ8IYB4 626 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 C20orf196Q8IYI0 205 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 BPIFB2Q8N4F0 458 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 OR52P1PQ8NH57 321 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 C10orf82Q8WW14 230 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 MAL2Q969L2 176 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 SLC25A36Q96CQ1 311 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 KTI12Q96EK9 354 aaPredicted RBP10.94□□□□□ -0.66
USP28-212ENST00000544750 TMEM19Q96HH6 336 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 C1orf147Q96MC9 270 aaPredicted RBP10.94□□□□□ -0.66
USP28-212ENST00000544750 CPPED1Q9BRF8 314 aaPredicted RBP10.94□□□□□ -0.66
USP28-212ENST00000544750 RSPO3Q9BXY4 272 aaPredicted RBP10.94□□□□□ -0.66
USP28-212ENST00000544750 RABEP2Q9H5N1 569 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 DENND2DQ9H6A0 471 aaPredicted RBP10.94□□□□□ -0.66
USP28-212ENST00000544750 NTN4Q9HB63 628 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 FZR1Q9UM11 496 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 TRIM33Q9UPN9 1127 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 PPIAL4AQ9Y536 164 aa10.94□□□□□ -0.66
USP28-212ENST00000544750 IGLV3-9A0A075B6K5 115 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 C17orf100A8MU93 164 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 MS4A18H0YCH9 400 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 M0R082 166 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 FBP2O00757 339 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 CD79AP11912 226 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 CRYBB2P43320 205 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 PIGFQ07326 219 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 ZP4Q12836 540 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 MS4A18Q3C1V0 323 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 LIN52Q52LA3 116 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 C6orf89Q6UWU4 347 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 SERPINA11Q86U17 422 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 DPP10Q8N608 796 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 ZNF417Q8TAU3 575 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 TSPEARQ8WU66 669 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 C22orf15Q8WYQ4 148 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 TAAR8Q969N4 342 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 RAB39BQ96DA2 213 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 LRR1Q96L50 414 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 ZNF587Q96SQ5 575 aaPredicted RBP10.93□□□□□ -0.66
USP28-212ENST00000544750 A4GALTQ9NPC4 353 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 SAR1AQ9NR31 198 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 DDX28Q9NUL7 540 aaKnown RBP10.93□□□□□ -0.66
USP28-212ENST00000544750 NKIRAS2Q9NYR9 191 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 LEF1Q9UJU2 399 aaPredicted RBP10.93□□□□□ -0.66
USP28-212ENST00000544750 ZNF346Q9UL40 294 aaKnown RBP10.93□□□□□ -0.66
USP28-212ENST00000544750 ZNF443Q9Y2A4 671 aaPredicted RBP10.93□□□□□ -0.66
USP28-212ENST00000544750 CORINQ9Y5Q5 1042 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 NOX1Q9Y5S8 564 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 DOCK11Q5JSL3 2073 aa10.93□□□□□ -0.66
USP28-212ENST00000544750 M0R3G1 203 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 AIM2O14862 343 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 CDC14BO60729 498 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 CLPTM1O96005 669 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 HPRP00739 348 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 GPX2P18283 190 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 GATA3P23771 443 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 PRTN3P24158 256 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 GRPRP30550 384 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 GIPRP48546 466 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 PTDSS1P48651 473 aaKnown RBP10.92□□□□□ -0.66
USP28-212ENST00000544750 CRISP3P54108 245 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 RAB1AP62820 205 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 MVKQ03426 396 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 SELPLGQ14242 412 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 MFSD13AQ14CX5 517 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 OCLNQ16625 522 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 MMEL1Q495T6 779 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 MIDNQ504T8 468 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 RUNDC3AQ59EK9 446 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 DCAF12L2Q5VW00 463 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 ZNF813Q6ZN06 617 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 DOK3Q7L591 496 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 DHDDSQ86SQ9 333 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 ADPRHL1Q8NDY3 354 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 SPATA9Q9BWV2 254 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 C1QTNF5Q9BXJ0 243 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 RAD21L1Q9H4I0 556 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 UNKLQ9H9P5 680 aaKnown RBP10.92□□□□□ -0.66
USP28-212ENST00000544750 BCL2L10Q9HD36 194 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 THUMPD1Q9NXG2 353 aaKnown RBP10.92□□□□□ -0.66
USP28-212ENST00000544750 CALML5Q9NZT1 146 aa10.92□□□□□ -0.66
USP28-212ENST00000544750 KLHL14Q9P2G3 628 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms