RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 LRFN4Q6PJG9 635 aa16.75■□□□□ 0.27
DDX55-211ENST00000544429 WFDC8Q8IUA0 241 aa16.75■□□□□ 0.27
DDX55-211ENST00000544429 ZNF519Q8TB69 540 aa16.75■□□□□ 0.27
DDX55-211ENST00000544429 ZNF566Q969W8 418 aa16.75■□□□□ 0.27
DDX55-211ENST00000544429 SLCO4A1Q96BD0 722 aa16.75■□□□□ 0.27
DDX55-211ENST00000544429 GLTPQ9NZD2 209 aa16.75■□□□□ 0.27
DDX55-211ENST00000544429 ANKRD17O75179 2603 aaKnown RBP16.75■□□□□ 0.27
DDX55-211ENST00000544429 ARPC4-TTLL3A0A0A6YYG9 625 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 ZNF99A8MXY4 864 aaPredicted RBP16.74■□□□□ 0.27
DDX55-211ENST00000544429 MCIDASD6RGH6 385 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 M0R3G1 203 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 ACADSP16219 412 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 GSSP48637 474 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 NR1H2P55055 460 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 GK3PQ14409 553 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 TBRG1Q3YBR2 411 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 HIKESHIQ53FT3 197 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 NCMAPQ5T1S8 102 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 PGBD2Q6P3X8 592 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 FAM122BQ7Z309 247 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 HDDC2Q7Z4H3 204 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 UTP4Q969X6 686 aaKnown RBP16.74■□□□□ 0.27
DDX55-211ENST00000544429 MUCL1Q96DR8 90 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 KCNK17Q96T54 332 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 NGBQ9NPG2 151 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 OBP2BQ9NPH6 170 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 KRCC1Q9NPI7 259 aaPredicted RBP16.74■□□□□ 0.27
DDX55-211ENST00000544429 CCM2LQ9NUG4 571 aaPredicted RBP16.74■□□□□ 0.27
DDX55-211ENST00000544429 STX18Q9P2W9 335 aaKnown RBP16.74■□□□□ 0.27
DDX55-211ENST00000544429 TMCC3Q9ULS5 477 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 AMDHD2Q9Y303 409 aa16.74■□□□□ 0.27
DDX55-211ENST00000544429 TNFRSF11BO00300 401 aa16.73■□□□□ 0.27
DDX55-211ENST00000544429 TRMUO75648 421 aaKnown RBP16.73■□□□□ 0.27
DDX55-211ENST00000544429 IGHG1P01857 330 aa16.73■□□□□ 0.27
DDX55-211ENST00000544429 CD14P08571 375 aa16.73■□□□□ 0.27
DDX55-211ENST00000544429 HOXB1P14653 301 aaPredicted RBP16.73■□□□□ 0.27
DDX55-211ENST00000544429 CTXN1P60606 82 aa16.73■□□□□ 0.27
DDX55-211ENST00000544429 RPL27P61353 136 aaKnown RBP16.73■□□□□ 0.27
DDX55-211ENST00000544429 ARF1P84077 181 aaKnown RBP16.73■□□□□ 0.27
DDX55-211ENST00000544429 THSD4Q6ZMP0 1018 aa16.73■□□□□ 0.27
DDX55-211ENST00000544429 CCDC121Q6ZUS5 278 aa16.73■□□□□ 0.27
DDX55-211ENST00000544429 SPATA24Q86W54 205 aa16.73■□□□□ 0.27
DDX55-211ENST00000544429 LINC00471Q8N535 108 aa16.73■□□□□ 0.27
DDX55-211ENST00000544429 NOXO1Q8NFA2 376 aa16.73■□□□□ 0.27
DDX55-211ENST00000544429 OR6N1Q8NGY5 312 aa16.73■□□□□ 0.27
DDX55-211ENST00000544429 OR52N5Q8NH56 324 aa16.73■□□□□ 0.27
DDX55-211ENST00000544429 HDAC2Q92769 488 aaKnown RBP16.73■□□□□ 0.27
DDX55-211ENST00000544429 PIK3IP1Q96FE7 263 aa16.73■□□□□ 0.27
DDX55-211ENST00000544429 PLPPR2Q96GM1 343 aa16.73■□□□□ 0.27
DDX55-211ENST00000544429 RSRC1Q96IZ7 334 aaKnown RBP16.73■□□□□ 0.27
DDX55-211ENST00000544429 TSPAN32Q96QS1 320 aa16.73■□□□□ 0.27
DDX55-211ENST00000544429 ULBP2Q9BZM5 246 aa16.73■□□□□ 0.27
DDX55-211ENST00000544429 B3GAT2Q9NPZ5 323 aa16.73■□□□□ 0.27
DDX55-211ENST00000544429 NRIP3Q9NQ35 241 aa16.73■□□□□ 0.27
DDX55-211ENST00000544429 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.73■□□□□ 0.27
DDX55-211ENST00000544429 ZNF346Q9UL40 294 aaKnown RBP16.73■□□□□ 0.27
DDX55-211ENST00000544429 AURKCQ9UQB9 309 aa16.73■□□□□ 0.27
DDX55-211ENST00000544429 HEATR1Q9H583 2144 aaKnown RBP16.72■□□□□ 0.27
DDX55-211ENST00000544429 PLCE1Q9P212 2302 aa16.72■□□□□ 0.27
DDX55-211ENST00000544429 DPRXA6NFQ7 191 aa16.72■□□□□ 0.27
DDX55-211ENST00000544429 UNC119BA6NIH7 251 aa16.72■□□□□ 0.27
DDX55-211ENST00000544429 EBAG9O00559 213 aa16.72■□□□□ 0.27
DDX55-211ENST00000544429 OR10H3O60404 316 aa16.72■□□□□ 0.27
DDX55-211ENST00000544429 NDUFB2O95178 105 aa16.72■□□□□ 0.27
DDX55-211ENST00000544429 CDH2P19022 906 aaPredicted RBP16.72■□□□□ 0.27
DDX55-211ENST00000544429 IFNGR2P38484 337 aa16.72■□□□□ 0.27
DDX55-211ENST00000544429 TSPAN31Q12999 210 aa16.72■□□□□ 0.27
DDX55-211ENST00000544429 FAM205BPQ63HN1 556 aa16.72■□□□□ 0.27
DDX55-211ENST00000544429 IGFN1Q86VF2 1251 aa16.72■□□□□ 0.27
DDX55-211ENST00000544429 ARIH2OSQ8N7S6 290 aa16.72■□□□□ 0.27
DDX55-211ENST00000544429 DUS3LQ96G46 650 aaKnown RBP16.72■□□□□ 0.27
DDX55-211ENST00000544429 KATNB1Q9BVA0 655 aa16.72■□□□□ 0.27
DDX55-211ENST00000544429 REEP1Q9H902 201 aa16.72■□□□□ 0.27
DDX55-211ENST00000544429 SMURF2Q9HAU4 748 aa16.72■□□□□ 0.27
DDX55-211ENST00000544429 A0A1W2PR80 420 aa16.71■□□□□ 0.27
DDX55-211ENST00000544429 FKBP6O75344 327 aa16.71■□□□□ 0.27
DDX55-211ENST00000544429 PAX7P23759 505 aa16.71■□□□□ 0.27
DDX55-211ENST00000544429 MICAQ29983 383 aa16.71■□□□□ 0.27
DDX55-211ENST00000544429 C10orf128Q5T292 105 aa16.71■□□□□ 0.27
DDX55-211ENST00000544429 FAM169BQ8N8A8 192 aa16.71■□□□□ 0.27
DDX55-211ENST00000544429 OR9Q2Q8NGE9 314 aa16.71■□□□□ 0.27
DDX55-211ENST00000544429 GNPDA2Q8TDQ7 276 aa16.71■□□□□ 0.27
DDX55-211ENST00000544429 MCHR2Q969V1 340 aa16.71■□□□□ 0.27
DDX55-211ENST00000544429 ALG12Q9BV10 488 aa16.71■□□□□ 0.27
DDX55-211ENST00000544429 ESRP2Q9H6T0 727 aaKnown RBP16.71■□□□□ 0.27
DDX55-211ENST00000544429 CRNNQ9UBG3 495 aaPredicted RBP16.71■□□□□ 0.27
DDX55-211ENST00000544429 ADAM18Q9Y3Q7 739 aa16.71■□□□□ 0.27
DDX55-211ENST00000544429 SAMHD1Q9Y3Z3 626 aaKnown RBP16.71■□□□□ 0.27
DDX55-211ENST00000544429 MAGED1Q9Y5V3 778 aaPredicted RBP16.71■□□□□ 0.27
DDX55-211ENST00000544429 A0A096LPE4 126 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 A0A1W2PPZ6 126 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 ZNF503-AS2A6NEH8 195 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 ARRDC5A6NEK1 342 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 DHHO43323 396 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 TXNDC12O95881 172 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 CST1P01037 141 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 QDPRP09417 244 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 APEHP13798 732 aaKnown RBP16.7■□□□□ 0.26
DDX55-211ENST00000544429 CLRN1P58418 232 aa16.7■□□□□ 0.26
DDX55-211ENST00000544429 BSPH1Q075Z2 132 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms