RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 GIPC3Q8TF64 312 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 HDAC2Q92769 488 aaKnown RBP13.25□□□□□ -0.29
CD9-210ENST00000543916 GTPBP3Q969Y2 492 aaKnown RBP13.25□□□□□ -0.29
CD9-210ENST00000543916 MUS81Q96NY9 551 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 RAB3IPQ96QF0 476 aaPredicted RBP13.25□□□□□ -0.29
CD9-210ENST00000543916 GPX7Q96SL4 187 aaPredicted RBP13.25□□□□□ -0.29
CD9-210ENST00000543916 ULBP2Q9BZM5 246 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 OR52D1Q9H346 318 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 DENND2DQ9H6A0 471 aaPredicted RBP13.25□□□□□ -0.29
CD9-210ENST00000543916 GLTPQ9NZD2 209 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 UNC79Q9P2D8 2635 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 A0A1W2PR80 420 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 A6NNC1 897 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 DEAF1O75398 565 aaPredicted RBP13.24□□□□□ -0.29
CD9-210ENST00000543916 SEC14L2O76054 403 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 IGHG1P01857 330 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 CD14P08571 375 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 CRYGSP22914 178 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 ACVR1BP36896 505 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 CLRN1P58418 232 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 ARF1P84077 181 aaKnown RBP13.24□□□□□ -0.29
CD9-210ENST00000543916 MYBPC1Q00872 1141 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 TGFBR3Q03167 851 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 DAZAP2Q15038 168 aaPredicted RBP13.24□□□□□ -0.29
CD9-210ENST00000543916 ATP6AP1Q15904 470 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 ZSCAN26Q16670 478 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 HIKESHIQ53FT3 197 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 TIMM23BQ5SRD1 257 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 LRFN4Q6PJG9 635 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 HDDC2Q7Z4H3 204 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 WFDC8Q8IUA0 241 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 WDR31Q8NA23 367 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 SYT14Q8NB59 555 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 PYDC1Q8WXC3 89 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 C14orf79Q96F83 325 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 SAMD8Q96LT4 415 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 Q96M85 177 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 KCNK17Q96T54 332 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 FEVQ99581 238 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 NIPSNAP1Q9BPW8 284 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 DGCR6LQ9BY27 220 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 NDEL1Q9GZM8 345 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 NELFAQ9H3P2 528 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 EGLN3Q9H6Z9 239 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 B3GAT2Q9NPZ5 323 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 NRIP3Q9NQ35 241 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 SLC17A5Q9NRA2 495 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 PDP1Q9P0J1 537 aaPredicted RBP13.24□□□□□ -0.29
CD9-210ENST00000543916 MGAT4BQ9UQ53 548 aa13.24□□□□□ -0.29
CD9-210ENST00000543916 ANKHD1Q8IWZ3 2542 aaKnown RBP13.24□□□□□ -0.29
CD9-210ENST00000543916 ARRDC5A6NEK1 342 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 DEFB108AA8MXU0 73 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 CENPBD1B2RD01 187 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 E2F6O75461 281 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 SH3BGRP55822 239 aaPredicted RBP13.23□□□□□ -0.29
CD9-210ENST00000543916 TLE4Q04727 773 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 FMODQ06828 376 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 RFX4Q33E94 735 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 MESTQ5EB52 335 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 OR7E24Q6IFN5 339 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 ALKBH2Q6NS38 261 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 C17orf78Q8N4C9 275 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 CLDN22Q8N7P3 220 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 ARIH2OSQ8N7S6 290 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 OR52N5Q8NH56 324 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 LRTOMTQ8WZ04 291 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 HSD17B8Q92506 261 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 BCL2L2Q92843 193 aaPredicted RBP13.23□□□□□ -0.29
CD9-210ENST00000543916 RASD2Q96D21 266 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 NMD3Q96D46 503 aaKnown RBP13.23□□□□□ -0.29
CD9-210ENST00000543916 BOD1Q96IK1 185 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 ZNF570Q96NI8 536 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 USB1Q9BQ65 265 aaKnown RBP13.23□□□□□ -0.29
CD9-210ENST00000543916 PLA2G12AQ9BZM1 189 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 ZNF226Q9NYT6 803 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 GRHPRQ9UBQ7 328 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 IER3IP1Q9Y5U9 82 aa13.23□□□□□ -0.29
CD9-210ENST00000543916 MAGED1Q9Y5V3 778 aaPredicted RBP13.23□□□□□ -0.29
CD9-210ENST00000543916 A0A096LPE4 126 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 TEX13CA0A0J9YWL9 993 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 A0A1W2PPZ6 126 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 FAM221AA4D161 298 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 ZNF99A8MXY4 864 aaPredicted RBP13.22□□□□□ -0.29
CD9-210ENST00000543916 H7C1C5 153 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 CASKO14936 926 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 CTAG2O75638 210 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 PPP1R3DO95685 299 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 TP53P04637 393 aaPredicted RBP13.22□□□□□ -0.29
CD9-210ENST00000543916 IGFBP1P08833 259 aaPredicted RBP13.22□□□□□ -0.29
CD9-210ENST00000543916 QDPRP09417 244 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 PRKACGP22612 351 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 FASP25445 335 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 SSTR2P30874 369 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 SDHAP31040 664 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 SLC6A6P31641 620 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 LCN6P62502 163 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 PPA1Q15181 289 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 TBRG1Q3YBR2 411 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 FAM205BPQ63HN1 556 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 ANKRD16Q6P6B7 361 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms