RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 IL1F10Q8WWZ1 152 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF471Q9BX82 626 aaPredicted RBP6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 ERVMER34-1Q9H9K5 563 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 B3GNT2Q9NY97 397 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 LAMA4Q16363 1823 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 POLR2AP24928 1970 aaKnown RBP6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 INMT-MINDY4F8WBC2 141 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF593O00488 134 aaPredicted RBP6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 TMPRSS11DO60235 418 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 LCMT2O60294 686 aaKnown RBP6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 IGHV3-9P01782 118 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 CD14P08571 375 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 RPS2P15880 293 aaKnown RBP6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 ELAVL4P26378 380 aaKnown RBP6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 IL2RGP31785 369 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 FXYD4P59646 89 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 SEC61A1P61619 476 aaKnown RBP6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 CAMK2BQ13554 666 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 GLYR1Q49A26 553 aaPredicted RBP6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 GFRALQ6UXV0 394 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 CCDC71LQ8N9Z2 235 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 CD300LFQ8TDQ1 290 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 PSMF1Q92530 271 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 ISL2Q96A47 359 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 C4orf36Q96KX1 117 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 ALG12Q9BV10 488 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 ABCG5Q9H222 651 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 KCNN3Q9UGI6 736 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 PROCRQ9UNN8 238 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 B4DXG7 233 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 UBFD1O14562 309 aaKnown RBP6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 PRICKLE3O43900 615 aaPredicted RBP6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 AMY2AP04746 511 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 MYF6P23409 242 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 EFNA3P52797 238 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 TBC1D28Q2M2D7 210 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC35F3Q8IY50 421 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 ABHD11Q8NFV4 315 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 CNOT9Q92600 299 aaKnown RBP6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 FOXRED1Q96CU9 486 aaPredicted RBP6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 TRIB1Q96RU8 372 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 MRI1Q9BV20 369 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 EGLN1Q9GZT9 426 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 EGLN3Q9H6Z9 239 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 NIPAL2Q9H841 368 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 ZFP57Q9NU63 452 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 GHRLQ9UBU3 117 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 AK6Q9Y3D8 172 aaKnown RBP6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 MARF1Q9Y4F3 1742 aaKnown RBP6.34□□□□□ -1.4
SRGAP1-206ENST00000543397 A0A087WUU8 490 aa6.34□□□□□ -1.4
SRGAP1-206ENST00000543397 TRBV4-1A0A0J9YWV2 114 aa6.34□□□□□ -1.4
SRGAP1-206ENST00000543397 A0A1B0GW15 77 aa6.34□□□□□ -1.4
SRGAP1-206ENST00000543397 LRRC30A6NM36 301 aa6.34□□□□□ -1.4
SRGAP1-206ENST00000543397 SELENBP1Q13228 472 aa6.34□□□□□ -1.4
SRGAP1-206ENST00000543397 LRRC37A5PQ49AS3 106 aa6.34□□□□□ -1.4
SRGAP1-206ENST00000543397 NDUFAF7Q7L592 441 aa6.34□□□□□ -1.4
SRGAP1-206ENST00000543397 KANSL1Q7Z3B3 1105 aa6.34□□□□□ -1.4
SRGAP1-206ENST00000543397 PRICKLE2Q7Z3G6 844 aa6.34□□□□□ -1.4
SRGAP1-206ENST00000543397 OR5M1Q8NGP8 315 aa6.34□□□□□ -1.4
SRGAP1-206ENST00000543397 ZFAND2BQ8WV99 257 aa6.34□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF226Q9NYT6 803 aa6.34□□□□□ -1.4
SRGAP1-206ENST00000543397 SPAG17Q6Q759 2223 aa6.34□□□□□ -1.4
SRGAP1-206ENST00000543397 ATG2BQ96BY7 2078 aa6.34□□□□□ -1.4
SRGAP1-206ENST00000543397 MYO5AQ9Y4I1 1855 aaKnown RBP6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 SEC16AO15027 2179 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 IGHV1OR21-1A0A087WYE8 117 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 FUOMA2VDF0 154 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 FBP2O00757 339 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 SERPINE2P07093 398 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 NID1P14543 1247 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 ARSBP15848 533 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 CDK5R2Q13319 367 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 COX20Q5RI15 118 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 SLX4IPQ5VYV7 408 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 RETREG3Q86VR2 466 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 C16orf52Q8NHV5 167 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 COQ8AQ8NI60 647 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 ISOC1Q96CN7 298 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 TIMD4Q96H15 378 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 MRGPRX3Q96LB0 322 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 VRK1Q99986 396 aaPredicted RBP6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 C20orf27Q9GZN8 174 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 TMEM38AQ9H6F2 299 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 SPTBN2O15020 2390 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 TMEM72A0PK05 275 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 METTL15A6NJ78 407 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 OR7C1O76099 320 aaPredicted RBP6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 IFNA5P01569 189 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 CD1BP29016 333 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 MAP2K3P46734 347 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 MAB21L1Q13394 359 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 GAB1Q13480 694 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 IHHQ14623 411 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 ACSM3Q53FZ2 586 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 TMEM215Q68D42 235 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 Q8NFD4 153 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 OR6T1Q8NGN1 323 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 OR4K15Q8NH41 348 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 C11orf40Q8WZ69 217 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 CREB3L1Q96BA8 519 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms