RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 ZCCHC24Q8N2G6 241 aaKnown RBP13.41□□□□□ -0.26
CSF1R-209ENST00000543093 GPR137CQ8N3F9 429 aa13.41□□□□□ -0.26
CSF1R-209ENST00000543093 FAM169BQ8N8A8 192 aa13.41□□□□□ -0.26
CSF1R-209ENST00000543093 PIK3C3Q8NEB9 887 aa13.41□□□□□ -0.26
CSF1R-209ENST00000543093 NUP37Q8NFH4 326 aa13.41□□□□□ -0.26
CSF1R-209ENST00000543093 NEU4Q8WWR8 484 aaPredicted RBP13.41□□□□□ -0.26
CSF1R-209ENST00000543093 MPP4Q96JB8 637 aa13.41□□□□□ -0.26
CSF1R-209ENST00000543093 DOK1Q99704 481 aa13.41□□□□□ -0.26
CSF1R-209ENST00000543093 NSRP1Q9H0G5 558 aaKnown RBP13.41□□□□□ -0.26
CSF1R-209ENST00000543093 ZNF442Q9H7R0 627 aa13.41□□□□□ -0.26
CSF1R-209ENST00000543093 FBXO9Q9UK97 447 aaPredicted RBP13.41□□□□□ -0.26
CSF1R-209ENST00000543093 AP3M1Q9Y2T2 418 aa13.41□□□□□ -0.26
CSF1R-209ENST00000543093 SH3GLB1Q9Y371 365 aa13.41□□□□□ -0.26
CSF1R-209ENST00000543093 NOX1Q9Y5S8 564 aa13.41□□□□□ -0.26
CSF1R-209ENST00000543093 SH3PXD2BA1X283 911 aa13.4□□□□□ -0.26
CSF1R-209ENST00000543093 VSTM5A8MXK1 200 aa13.4□□□□□ -0.26
CSF1R-209ENST00000543093 LRRN3E7EW58 273 aa13.4□□□□□ -0.26
CSF1R-209ENST00000543093 KPNA4O00629 521 aaPredicted RBP13.4□□□□□ -0.26
CSF1R-209ENST00000543093 HPRP00739 348 aa13.4□□□□□ -0.26
CSF1R-209ENST00000543093 CBR1P16152 277 aa13.4□□□□□ -0.26
CSF1R-209ENST00000543093 APEX1P27695 318 aaKnown RBP13.4□□□□□ -0.26
CSF1R-209ENST00000543093 TAS2R41P59536 307 aa13.4□□□□□ -0.26
CSF1R-209ENST00000543093 DEF8Q6ZN54 512 aa13.4□□□□□ -0.26
CSF1R-209ENST00000543093 ANKK1Q8NFD2 765 aa13.4□□□□□ -0.26
CSF1R-209ENST00000543093 OR5J2Q8NH18 312 aa13.4□□□□□ -0.26
CSF1R-209ENST00000543093 OR2M2Q96R28 347 aa13.4□□□□□ -0.26
CSF1R-209ENST00000543093 SLC19A3Q9BZV2 496 aa13.4□□□□□ -0.26
CSF1R-209ENST00000543093 POLR2J2Q9GZM3 115 aaKnown RBP13.4□□□□□ -0.26
CSF1R-209ENST00000543093 POLR2J3Q9H1A7 115 aaKnown RBP13.4□□□□□ -0.26
CSF1R-209ENST00000543093 DYNLRB1Q9NP97 96 aa13.4□□□□□ -0.26
CSF1R-209ENST00000543093 SVEP1Q4LDE5 3571 aa13.4□□□□□ -0.27
CSF1R-209ENST00000543093 IGHV2OR16-5A0A0B4J2B6 119 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 TMEM129A0AVI4 362 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 ELOVL7A1L3X0 281 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 ZNF503-AS2A6NEH8 195 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 MS4A18H0YCH9 400 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 RPL36A-HNRNPH2H7BZ11 118 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 LILRA1O75019 489 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 OR6A2O95222 327 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 LYPD3O95274 346 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 THY1P04216 161 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 TACSTD2P09758 323 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 HLA-DOBP13765 273 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 TNFRSF1BP20333 461 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 AHCYP23526 432 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 SRP14P37108 136 aaKnown RBP13.39□□□□□ -0.27
CSF1R-209ENST00000543093 NPRL3Q12980 569 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 ZNF74Q16587 644 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 CEACAM16Q2WEN9 425 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 MS4A18Q3C1V0 323 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 CYBRD1Q53TN4 286 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 PXKQ7Z7A4 578 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 MDP1Q86V88 176 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 TSPYL5Q86VY4 417 aaPredicted RBP13.39□□□□□ -0.27
CSF1R-209ENST00000543093 TMEM123Q8N131 208 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 ZNF837Q96EG3 531 aaPredicted RBP13.39□□□□□ -0.27
CSF1R-209ENST00000543093 C1orf159Q96HA4 380 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 TPD52L3Q96J77 140 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 SNX18Q96RF0 628 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 ELAC2Q9BQ52 826 aaKnown RBP13.39□□□□□ -0.27
CSF1R-209ENST00000543093 ZNF426Q9BUY5 554 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 FAM107BQ9H098 131 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 GPR35Q9HC97 309 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 NANSQ9NR45 359 aa13.39□□□□□ -0.27
CSF1R-209ENST00000543093 TMEFF2Q9UIK5 374 aaPredicted RBP13.39□□□□□ -0.27
CSF1R-209ENST00000543093 PLPP3O14495 311 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 TCF21O43680 179 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 SERPINI2O75830 405 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 SEC14L2O76054 403 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 OR5F1O95221 314 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 CH25HO95992 272 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 IGFBP1P08833 259 aaPredicted RBP13.38□□□□□ -0.27
CSF1R-209ENST00000543093 ADORA3P0DMS8 318 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 UMPSP11172 480 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 KDELR2P33947 212 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 ARR3P36575 388 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 CAPZA2P47755 286 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 NUDT2P50583 147 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 SLC7A2P52569 658 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 SNTB2Q13425 540 aaKnown RBP13.38□□□□□ -0.27
CSF1R-209ENST00000543093 TRIP10Q15642 601 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 CARD17Q5XLA6 110 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 CDK20Q8IZL9 346 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 ZNF786Q8N393 782 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 RFLNBQ8N5W9 214 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 LINC01356Q8N9X3 169 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 UBASH3BQ8TF42 649 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 LZICQ8WZA0 190 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 HPS1Q92902 700 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 HOPXQ9BPY8 73 aaPredicted RBP13.38□□□□□ -0.27
CSF1R-209ENST00000543093 EFCAB1Q9HAE3 211 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 CRLF2Q9HC73 371 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 B3GAT2Q9NPZ5 323 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 MED29Q9NX70 200 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 CMTM6Q9NX76 183 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 ZNF229Q9UJW7 825 aa13.38□□□□□ -0.27
CSF1R-209ENST00000543093 C11orf98E9PRG8 122 aa13.37□□□□□ -0.27
CSF1R-209ENST00000543093 LYNX1G3V0Z9 82 aa13.37□□□□□ -0.27
CSF1R-209ENST00000543093 M0R3G1 203 aa13.37□□□□□ -0.27
CSF1R-209ENST00000543093 SHOX2O60902 331 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms