RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 ROM1Q03395 351 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 TOMM20Q15388 145 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 TBRG1Q3YBR2 411 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 VWA2Q5GFL6 755 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 C1orf140Q5VVS0 124 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 DNM1P34Q6PK57 102 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 RPTNQ6XPR3 784 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 ANKRD37Q7Z713 158 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 RFLNBQ8N5W9 214 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 GATSQ8NAP1 163 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 OR5AK2Q8NH90 309 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 MFSD8Q8NHS3 518 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 ZPLD1Q8TCW7 415 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 ZNRF4Q8WWF5 429 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 HGDQ93099 445 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 GON7Q9BXV9 100 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 POTEKPQ9BYX7 375 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 HDHD2Q9H0R4 259 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 MMP28Q9H239 520 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 DPAGT1Q9H3H5 408 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 PTTG3PQ9NZH4 202 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 MRM2Q9UI43 246 aaKnown RBP8.93□□□□□ -0.98
SS18-205ENST00000542420 LAMP5Q9UJQ1 280 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 V9GY05 133 aa8.93□□□□□ -0.98
SS18-205ENST00000542420 UNC13CQ8NB66 2214 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 A0A1W2PQ72 361 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 C7orf66A4D0T2 115 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 SMIM30A4D0T7 59 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 PRSS37A4D1T9 235 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 IFITM5A6NNB3 132 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 DVL2O14641 736 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 DHFRP00374 187 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 PRKACAP17612 351 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 ERP29P30040 261 aaKnown RBP8.92□□□□□ -0.98
SS18-205ENST00000542420 EFNA3P52797 238 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 OR10A3P58181 314 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 AP3S2P59780 193 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 GPR176Q14439 515 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 TATDN3Q17R31 274 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 SLC25A35Q3KQZ1 300 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 TEX30Q5JUR7 227 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 PEAR1Q5VY43 1037 aaPredicted RBP8.92□□□□□ -0.98
SS18-205ENST00000542420 ZNF57Q68EA5 555 aaPredicted RBP8.92□□□□□ -0.98
SS18-205ENST00000542420 MARCH3Q86UD3 253 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 ADGRG3Q86Y34 549 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 OTOSQ8NHW6 89 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 STT3BQ8TCJ2 826 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 GPR148Q8TDV2 347 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 SMIM4Q8WVI0 70 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 METTL21AQ8WXB1 218 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 SDHAF3Q9NRP4 125 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 NUP50Q9UKX7 468 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 ARID1BQ8NFD5 2236 aaPredicted RBP8.92□□□□□ -0.98
SS18-205ENST00000542420 TMEM72A0PK05 275 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 TRABD2BA6NFA1 517 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 INMT-MINDY4F8WBC2 141 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 H3BUI4 141 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 GPR171O14626 319 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 ALOX12BO75342 701 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 PSKH1P11801 424 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 ITPKBP27987 946 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 TRA2AQ13595 282 aaKnown RBP eCLIP8.92□□□□□ -0.98
SS18-205ENST00000542420 TOMM34Q15785 309 aaPredicted RBP8.92□□□□□ -0.98
SS18-205ENST00000542420 STK11Q15831 433 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 NKAIN1Q4KMZ8 207 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 TOR2AQ5JU69 321 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 FAM27D1Q5T7N8 215 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 ZNF385CQ66K41 422 aaPredicted RBP8.92□□□□□ -0.98
SS18-205ENST00000542420 TMEM81Q6P7N7 255 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 KCTD18Q6PI47 426 aaPredicted RBP8.92□□□□□ -0.98
SS18-205ENST00000542420 CHRDL2Q6WN34 429 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 OR6V1Q8N148 313 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 YIPF7Q8N8F6 280 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 YIPF5Q969M3 257 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 DCBLD2Q96PD2 775 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 OR14A2Q96R54 314 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 OR8B4Q96RC9 309 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 NOX4Q9NPH5 578 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 SLC17A5Q9NRA2 495 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 SLC22A11Q9NSA0 550 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 DDX28Q9NUL7 540 aaKnown RBP8.92□□□□□ -0.98
SS18-205ENST00000542420 ING3Q9NXR8 418 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 NXT1Q9UKK6 140 aaKnown RBP8.92□□□□□ -0.98
SS18-205ENST00000542420 RARRES3Q9UL19 164 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 B9D1Q9UPM9 204 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 SIT1Q9Y3P8 196 aa8.92□□□□□ -0.98
SS18-205ENST00000542420 LAMA2P24043 3122 aaKnown RBP8.92□□□□□ -0.98
SS18-205ENST00000542420 CCDC85CA6NKD9 419 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 OR4C45A6NMZ5 311 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 A8MV72 311 aaPredicted RBP8.91□□□□□ -0.98
SS18-205ENST00000542420 LEUTXA8MZ59 168 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 FTCDNL1E5RQL4 147 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 PLPP3O14495 311 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 PIN1P1O15428 100 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 NDUFA2O43678 99 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 ZFPL1O95159 310 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 HEXBP07686 556 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 CD37P11049 281 aa8.91□□□□□ -0.98
SS18-205ENST00000542420 DAP3P51398 398 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms