RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 ZNF74Q16587 644 aa17.09■□□□□ 0.33
DDX11-220ENST00000542244 PXKQ7Z7A4 578 aa17.09■□□□□ 0.33
DDX11-220ENST00000542244 RANBP3LQ86VV4 465 aaPredicted RBP17.09■□□□□ 0.33
DDX11-220ENST00000542244 OR5J2Q8NH18 312 aa17.09■□□□□ 0.33
DDX11-220ENST00000542244 NEU4Q8WWR8 484 aaPredicted RBP17.09■□□□□ 0.33
DDX11-220ENST00000542244 CGREF1Q99674 301 aa17.09■□□□□ 0.33
DDX11-220ENST00000542244 SELENONQ9NZV5 590 aa17.09■□□□□ 0.33
DDX11-220ENST00000542244 ANGPT4Q9Y264 503 aa17.09■□□□□ 0.33
DDX11-220ENST00000542244 CMAHPQ9Y471 501 aa17.09■□□□□ 0.33
DDX11-220ENST00000542244 ZNF726A6NNF4 738 aa17.08■□□□□ 0.32
DDX11-220ENST00000542244 SERPINB7O75635 380 aa17.08■□□□□ 0.32
DDX11-220ENST00000542244 CCL2P13500 99 aa17.08■□□□□ 0.32
DDX11-220ENST00000542244 APEX1P27695 318 aaKnown RBP17.08■□□□□ 0.32
DDX11-220ENST00000542244 CSNK1A1P48729 337 aa17.08■□□□□ 0.32
DDX11-220ENST00000542244 RUNX1T1Q06455 604 aa17.08■□□□□ 0.32
DDX11-220ENST00000542244 FXNQ16595 210 aa17.08■□□□□ 0.32
DDX11-220ENST00000542244 CYP51A1Q16850 503 aa17.08■□□□□ 0.32
DDX11-220ENST00000542244 SLC35D2Q76EJ3 337 aa17.08■□□□□ 0.32
DDX11-220ENST00000542244 C11orf65Q8NCR3 313 aa17.08■□□□□ 0.32
DDX11-220ENST00000542244 SH3GL3Q99963 347 aa17.08■□□□□ 0.32
DDX11-220ENST00000542244 PRSS27Q9BQR3 290 aa17.08■□□□□ 0.32
DDX11-220ENST00000542244 LEF1Q9UJU2 399 aaPredicted RBP17.08■□□□□ 0.32
DDX11-220ENST00000542244 SLC13A4Q9UKG4 626 aa17.08■□□□□ 0.32
DDX11-220ENST00000542244 SLC7A7Q9UM01 511 aa17.08■□□□□ 0.32
DDX11-220ENST00000542244 FBP2O00757 339 aa17.07■□□□□ 0.32
DDX11-220ENST00000542244 CHP2O43745 196 aa17.07■□□□□ 0.32
DDX11-220ENST00000542244 NCR1O76036 304 aa17.07■□□□□ 0.32
DDX11-220ENST00000542244 TNFRSF1BP20333 461 aa17.07■□□□□ 0.32
DDX11-220ENST00000542244 ALKBH6Q3KRA9 238 aa17.07■□□□□ 0.32
DDX11-220ENST00000542244 ZNF613Q6PF04 617 aa17.07■□□□□ 0.32
DDX11-220ENST00000542244 CCDC36Q8IYA8 594 aa17.07■□□□□ 0.32
DDX11-220ENST00000542244 DPP10Q8N608 796 aa17.07■□□□□ 0.32
DDX11-220ENST00000542244 ADAMTS16Q8TE57 1224 aa17.07■□□□□ 0.32
DDX11-220ENST00000542244 YIPF5Q969M3 257 aa17.07■□□□□ 0.32
DDX11-220ENST00000542244 NARFLQ9H6Q4 476 aa17.07■□□□□ 0.32
DDX11-220ENST00000542244 KAT8Q9H7Z6 458 aaKnown RBP17.07■□□□□ 0.32
DDX11-220ENST00000542244 MOV10Q9HCE1 1003 aaKnown RBP17.07■□□□□ 0.32
DDX11-220ENST00000542244 MEPEQ9NQ76 525 aaPredicted RBP17.07■□□□□ 0.32
DDX11-220ENST00000542244 REV1Q9UBZ9 1251 aa17.07■□□□□ 0.32
DDX11-220ENST00000542244 NDUFAF1Q9Y375 327 aa17.07■□□□□ 0.32
DDX11-220ENST00000542244 FMO6PO60774 539 aa17.06■□□□□ 0.32
DDX11-220ENST00000542244 SHOX2O60902 331 aaPredicted RBP17.06■□□□□ 0.32
DDX11-220ENST00000542244 CLPTM1O96005 669 aa17.06■□□□□ 0.32
DDX11-220ENST00000542244 ERVS71-1P61550 626 aa17.06■□□□□ 0.32
DDX11-220ENST00000542244 SWT1Q5T5J6 900 aaKnown RBP17.06■□□□□ 0.32
DDX11-220ENST00000542244 IL17RDQ8NFM7 739 aa17.06■□□□□ 0.32
DDX11-220ENST00000542244 OR10A6Q8NH74 314 aa17.06■□□□□ 0.32
DDX11-220ENST00000542244 TSPAN32Q96QS1 320 aa17.06■□□□□ 0.32
DDX11-220ENST00000542244 OR51B6Q9H340 312 aa17.06■□□□□ 0.32
DDX11-220ENST00000542244 B3GAT2Q9NPZ5 323 aa17.06■□□□□ 0.32
DDX11-220ENST00000542244 GLTPQ9NZD2 209 aa17.06■□□□□ 0.32
DDX11-220ENST00000542244 CORO2BQ9UQ03 480 aa17.06■□□□□ 0.32
DDX11-220ENST00000542244 SYNGR3O43761 229 aa17.05■□□□□ 0.32
DDX11-220ENST00000542244 MT-ATP6P00846 226 aa17.05■□□□□ 0.32
DDX11-220ENST00000542244 NAT2P11245 290 aa17.05■□□□□ 0.32
DDX11-220ENST00000542244 FUT4P22083 530 aa17.05■□□□□ 0.32
DDX11-220ENST00000542244 THBS2P35442 1172 aa17.05■□□□□ 0.32
DDX11-220ENST00000542244 GLRXP35754 106 aa17.05■□□□□ 0.32
DDX11-220ENST00000542244 CHN2P52757 468 aa17.05■□□□□ 0.32
DDX11-220ENST00000542244 CDH15P55291 814 aa17.05■□□□□ 0.32
DDX11-220ENST00000542244 MYBPC1Q00872 1141 aa17.05■□□□□ 0.32
DDX11-220ENST00000542244 ZP4Q12836 540 aa17.05■□□□□ 0.32
DDX11-220ENST00000542244 NFYCQ13952 458 aa17.05■□□□□ 0.32
DDX11-220ENST00000542244 TRMT5Q32P41 509 aaKnown RBP17.05■□□□□ 0.32
DDX11-220ENST00000542244 SLC22A24Q8N4F4 322 aa17.05■□□□□ 0.32
DDX11-220ENST00000542244 ZNF540Q8NDQ6 660 aa17.05■□□□□ 0.32
DDX11-220ENST00000542244 BHLHE22Q8NFJ8 381 aaPredicted RBP17.05■□□□□ 0.32
DDX11-220ENST00000542244 OR6X1Q8NH79 312 aa17.05■□□□□ 0.32
DDX11-220ENST00000542244 DYDC1Q8WWB3 177 aa17.05■□□□□ 0.32
DDX11-220ENST00000542244 GTF3AQ92664 365 aaKnown RBP17.05■□□□□ 0.32
DDX11-220ENST00000542244 ZNF426Q9BUY5 554 aa17.05■□□□□ 0.32
DDX11-220ENST00000542244 NPHS2Q9NP85 383 aa17.05■□□□□ 0.32
DDX11-220ENST00000542244 ANK2Q01484 3957 aa17.04■□□□□ 0.32
DDX11-220ENST00000542244 FAM157AC9JC47 383 aa17.04■□□□□ 0.32
DDX11-220ENST00000542244 RNF13O43567 381 aa17.04■□□□□ 0.32
DDX11-220ENST00000542244 C8BP07358 591 aa17.04■□□□□ 0.32
DDX11-220ENST00000542244 ASAH2BP0C7U1 165 aa17.04■□□□□ 0.32
DDX11-220ENST00000542244 FAM157BP0CG42 384 aa17.04■□□□□ 0.32
DDX11-220ENST00000542244 PGA4P0DJD7 388 aa17.04■□□□□ 0.32
DDX11-220ENST00000542244 PGA3P0DJD8 388 aa17.04■□□□□ 0.32
DDX11-220ENST00000542244 RBBP4Q09028 425 aa17.04■□□□□ 0.32
DDX11-220ENST00000542244 SF3A3Q12874 501 aaKnown RBP eCLIP17.04■□□□□ 0.32
DDX11-220ENST00000542244 HNRNPA0Q13151 305 aaKnown RBP17.04■□□□□ 0.32
DDX11-220ENST00000542244 RABL3Q5HYI8 236 aa17.04■□□□□ 0.32
DDX11-220ENST00000542244 TTC33Q6PID6 262 aaPredicted RBP17.04■□□□□ 0.32
DDX11-220ENST00000542244 NKAIN4Q8IVV8 208 aa17.04■□□□□ 0.32
DDX11-220ENST00000542244 PFN4Q8NHR9 129 aa17.04■□□□□ 0.32
DDX11-220ENST00000542244 CLDND2Q8NHS1 167 aa17.04■□□□□ 0.32
DDX11-220ENST00000542244 ZNF347Q96SE7 839 aa17.04■□□□□ 0.32
DDX11-220ENST00000542244 INTS9Q9NV88 658 aaKnown RBP17.04■□□□□ 0.32
DDX11-220ENST00000542244 TMEM38BQ9NVV0 291 aa17.04■□□□□ 0.32
DDX11-220ENST00000542244 DUSP13Q9UII6 198 aa17.04■□□□□ 0.32
DDX11-220ENST00000542244 TRAPPC13A5PLN9 417 aa17.03■□□□□ 0.32
DDX11-220ENST00000542244 VSTM5A8MXK1 200 aa17.03■□□□□ 0.32
DDX11-220ENST00000542244 M0R233 179 aa17.03■□□□□ 0.32
DDX11-220ENST00000542244 DHHO43323 396 aa17.03■□□□□ 0.32
DDX11-220ENST00000542244 RAB36O95755 333 aa17.03■□□□□ 0.32
DDX11-220ENST00000542244 SERPINA5P05154 406 aa17.03■□□□□ 0.32
DDX11-220ENST00000542244 F13BP05160 661 aa17.03■□□□□ 0.32
DDX11-220ENST00000542244 QDPRP09417 244 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms