RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 DCAF13Q9NV06 445 aaKnown RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 CLN6Q9NWW5 311 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 TMEM161AQ9NX61 479 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 CNIH4Q9P003 139 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 IL17CQ9P0M4 197 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 PIPOXQ9P0Z9 390 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 DOK5Q9P104 306 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 RHCGQ9UBD6 479 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 SAE1Q9UBE0 346 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 PRODH2Q9UF12 536 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 VAX2Q9UIW0 290 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 TUBD1Q9UJT1 453 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 CCNL1Q9UK58 526 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 UTS2RQ9UKP6 389 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 IKZF2Q9UKS7 526 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 CLEC4EQ9ULY5 219 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 A4GNTQ9UNA3 340 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 NPIPA1Q9UND3 350 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 ZNF337Q9Y3M9 751 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 TMEM56-RWDD3S4R434 201 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 BAZ2BQ9UIF8 2168 aaKnown RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 DUOX1Q9NRD9 1551 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 ADAMTSL1Q8N6G6 1762 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 SBF1O95248 1867 aa3.96□□□□□ -1.77
SNHG1-219ENST00000542112 POLR2AP24928 1970 aaKnown RBP3.96□□□□□ -1.77
SNHG1-219ENST00000542112 ARFGEF1Q9Y6D6 1849 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 A0A087WZY1 265 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 A0A096LPI6 279 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 TRDV1A0A1B0GX56 115 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 ARRDC5A6NEK1 342 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 FAM220BPB1ANY3 271 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 F5H5P2 479 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 ZNF749O43361 778 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 TLX2O43763 284 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 NME2P1O60361 137 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 TPST2O60704 377 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 MMP23AO75900 390 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 UBL3O95164 117 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 CDRT1O95170 752 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 SYNGR4O95473 234 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 SNAI1O95863 264 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 SCGB1D1O95968 90 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 HPRT1P00492 218 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 PDYNP01213 254 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 PTHP01270 115 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 CD5P06127 495 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 UMODP07911 640 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 ADRA2AP08913 450 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 POU2F2P09086 479 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 CTSAP10619 480 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 BCKDHAP12694 445 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 OSMP13725 252 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 FOSL2P15408 326 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 ZNF7P17097 686 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 PSMB1P20618 241 aaKnown RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 ITPKBP27987 946 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 ADORA1P30542 326 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 GABRA5P31644 462 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 AKT1P31749 480 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 BRS3P32247 399 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 BTCP35070 178 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 RBM34P42696 430 aaKnown RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 PTGER3P43115 390 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 CAMLGP49069 296 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 TTPAP49638 278 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 PDLIM4P50479 330 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 SLC16A1P53985 500 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 PNLIPRP2P54317 469 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 DVL1P1P54792 670 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 CDKN2DP55273 166 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 LGALS4P56470 323 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 ZP1P60852 638 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 CCL7P80098 99 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 H3F3AP84243 136 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 CDK5Q00535 292 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 FABP5Q01469 135 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 ARHGAP1Q07960 439 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 TRA2AQ13595 282 aaKnown RBP eCLIP3.96□□□□□ -1.782e-56■■■■□ 20.9
SNHG1-219ENST00000542112 HERPUD1Q15011 391 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 PTGES3Q15185 160 aaKnown RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 UBE2V2Q15819 145 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 SSX1Q16384 188 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 RPE65Q16518 533 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 MAPK14Q16539 360 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 PTCHD3Q3KNS1 767 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 SPDYE7PQ495Y7 208 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 EIPR1Q53HC9 387 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 PLEKHS1Q5SXH7 462 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 GGNBP1Q5YKI7 109 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 ATG9BQ674R7 924 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 ZNF626Q68DY1 528 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 KIAA0930Q6ICG6 404 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 OR2T5Q6IEZ7 315 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 OR2A2Q6IF42 318 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 GJB7Q6PEY0 223 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 PSRC1Q6PGN9 363 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-219ENST00000542112 HEPN1Q6WQI6 88 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 KCTD9Q7L273 389 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 DET1Q7L5Y6 550 aa3.96□□□□□ -1.78
SNHG1-219ENST00000542112 OR2W3Q7Z3T1 314 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms