RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 RAB39AQ14964 217 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 ZMYND11Q15326 602 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 ATAD3BQ5T9A4 648 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 SLC27A4Q6P1M0 643 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 TMEM53Q6P2H8 277 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 EMBQ6PCB8 327 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 C3orf62Q6ZUJ4 267 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 C16orf62Q7Z3J2 963 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 KLBQ86Z14 1044 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 EPHX4Q8IUS5 362 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 NATD1Q8N6N6 113 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 SDR9C7Q8NEX9 313 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 NSMAFQ92636 917 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 CIDECQ96AQ7 238 aaPredicted RBP7.87□□□□□ -1.15
YBX3-211ENST00000541351 MTERF3Q96E29 417 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 CLPTM1LQ96KA5 538 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 LRR1Q96L50 414 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 SAMD8Q96LT4 415 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 ZNF75AQ96N20 296 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 MECRQ9BV79 373 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 C1QTNF3Q9BXJ4 246 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 REEP4Q9H6H4 257 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 CNTD2Q9H8S5 307 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 POLE3Q9NRF9 147 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.87□□□□□ -1.15
YBX3-211ENST00000541351 EIF3KQ9UBQ5 218 aaKnown RBP7.87□□□□□ -1.15
YBX3-211ENST00000541351 JRKLQ9Y4A0 524 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 POLR3HQ9Y535 204 aaPredicted RBP7.87□□□□□ -1.15
YBX3-211ENST00000541351 DYNC2H1Q8NCM8 4307 aaKnown RBP7.87□□□□□ -1.15
YBX3-211ENST00000541351 RYR2Q92736 4967 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 IQCMA0A1B0GVH7 501 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 PRAMEF27A3QJZ7 478 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 A8MVM7 634 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 ZNF879B4DU55 563 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 H3BSA7 217 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 M0R3G1 203 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 FAAHO00519 579 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 ANGPTL7O43827 346 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 PEX14O75381 377 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 UGT2B17O75795 530 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 SUPT7LO94864 414 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 PF4P02776 101 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 SSTR1P30872 391 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 HSD17B3P37058 310 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 RPL3P39023 403 aaKnown RBP7.86□□□□□ -1.15
YBX3-211ENST00000541351 PITPNBP48739 271 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 NPY4RP50391 375 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 SERPINB8P50452 374 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 PKNOX1P55347 436 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 ETF1P62495 437 aaKnown RBP7.86□□□□□ -1.15
YBX3-211ENST00000541351 HPCAP84074 193 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 GUCY2DQ02846 1103 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 EGFEM1PQ0D2K5 195 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 FASTKD3Q14CZ7 662 aaKnown RBP7.86□□□□□ -1.15
YBX3-211ENST00000541351 FITM2Q8N6M3 262 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 PNLDC1Q8NA58 520 aaKnown RBP7.86□□□□□ -1.15
YBX3-211ENST00000541351 OR1J1Q8NGS3 322 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 SFXN5Q8TD22 340 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 OXGR1Q96P68 337 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 PRPF18Q99633 342 aaKnown RBP7.86□□□□□ -1.15
YBX3-211ENST00000541351 FOXB1Q99853 325 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 TSPYL1Q9H0U9 437 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 FOXJ3Q9UPW0 622 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 PPP1R3CQ9UQK1 317 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 STAB2Q8WWQ8 2551 aa7.86□□□□□ -1.15
YBX3-211ENST00000541351 CENPVL1A0A0U1RR11 272 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 CENPVL3A0A0U1RRI6 287 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 H3BQF6 201 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 PPP6CO00743 305 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 FBP2O00757 339 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 EIF3HO15372 352 aaKnown RBP eCLIP7.85□□□□□ -1.15
YBX3-211ENST00000541351 MFN2O95140 757 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 AHSA1O95433 338 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 PAHP00439 452 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 GUSBP08236 651 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 VSIG10L2P0DP72 767 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 B4GALT1P15291 398 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 TAC1P20366 129 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 APLNRP35414 380 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 CFHR2P36980 270 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 CRATP43155 626 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 MMP15P51511 669 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 COPZ1P61923 177 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 KCNJ10P78508 379 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 MFSD13AQ14CX5 517 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 LSM12Q3MHD2 195 aaKnown RBP7.85□□□□□ -1.15
YBX3-211ENST00000541351 ZNF774Q6NX45 483 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 UNQ9370/PRO34162Q6UXP9 181 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 ZNF440Q8IYI8 595 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 GEMIN6Q8WXD5 167 aaKnown RBP7.85□□□□□ -1.15
YBX3-211ENST00000541351 DACT3Q96B18 629 aaPredicted RBP7.85□□□□□ -1.15
YBX3-211ENST00000541351 OR7D2Q96RA2 312 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 MRPL57Q9BQC6 102 aaKnown RBP7.85□□□□□ -1.15
YBX3-211ENST00000541351 RHOXF2Q9BQY4 288 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 ULBP2Q9BZM5 246 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 ZNF350Q9GZX5 532 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 FAM234AQ9H0X4 552 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 PPA2Q9H2U2 334 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 OR51B6Q9H340 312 aa7.85□□□□□ -1.15
YBX3-211ENST00000541351 ZNF225Q9UK10 706 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms