RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 EIF1AXP47813 144 aaKnown RBP9.49□□□□□ -0.89
CHFR-219ENST00000541341 PRKAG1P54619 331 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 VSX2P58304 361 aaPredicted RBP9.49□□□□□ -0.89
CHFR-219ENST00000541341 EIF5AP63241 154 aaKnown RBP9.49□□□□□ -0.89
CHFR-219ENST00000541341 DGCR2P98153 550 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 FOXD4Q12950 439 aaPredicted RBP9.49□□□□□ -0.89
CHFR-219ENST00000541341 TUSC1Q2TAM9 212 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 METRNLQ641Q3 311 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 SLC25A25Q6KCM7 469 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 DNM1P46Q6ZS02 220 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 TAF8Q7Z7C8 310 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 ZNF227Q86WZ6 799 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 GKN2Q86XP6 184 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 LINC00518Q8N0U6 118 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 ZNF619Q8N2I2 560 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 SVBPQ8N300 66 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 OR11G2Q8NGC1 345 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 OR6N1Q8NGY5 312 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 OR2L8Q8NGY9 312 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 ZNF417Q8TAU3 575 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 THEM6Q8WUY1 208 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 SLC22A18Q96BI1 424 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 BPIFA2Q96DR5 249 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 PGLYRP3Q96LB9 341 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 STRADBQ9C0K7 418 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 ARL6Q9H0F7 186 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 IFT22Q9H7X7 185 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 SCPEP1Q9HB40 452 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 TCF7L1Q9HCS4 588 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 DUSP22Q9NRW4 184 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 FOXJ2Q9P0K8 574 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 SLC23A2Q9UGH3 650 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 SLC7A7Q9UM01 511 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 RCE1Q9Y256 329 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 SSUH2Q9Y2M2 353 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 SLC6A5Q9Y345 797 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 TMEM14AQ9Y6G1 99 aa9.49□□□□□ -0.89
CHFR-219ENST00000541341 A0A087WV62 115 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 CIB4A0PJX0 185 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 SHISA3A0PJX4 238 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 GXYLT2A0PJZ3 443 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 SMIM30A4D0T7 59 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 RFPL4AA6NLU0 287 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 RFPL4AL1F8VTS6 287 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 SOCS6O14544 535 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 IMPA2O14732 288 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 ARPC1BO15143 372 aaKnown RBP9.48□□□□□ -0.89
CHFR-219ENST00000541341 P2RX6O15547 441 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 TMPRSS11DO60235 418 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 SUSD5O60279 629 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 RDH16O75452 317 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 ERAL1O75616 437 aaKnown RBP9.48□□□□□ -0.89
CHFR-219ENST00000541341 CH25HO95992 272 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 AKAIN1P0CW23 69 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 F3P13726 295 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 NID1P14543 1247 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 HTR2AP28223 471 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 SSTR2P30874 369 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 CBX5P45973 191 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 GPR4P46093 362 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 RAB28P51157 221 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 CCR6P51684 374 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 GPR143P51810 404 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 SLC16A1P53985 500 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 B2MP61769 119 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 PRSS53Q2L4Q9 553 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 MANEAQ5SRI9 462 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 IGF2-ASQ6U949 168 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 APOOLQ6UXV4 268 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 SHFQ7M4L6 423 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 ZNF550Q7Z398 422 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 GLB1L2Q8IW92 636 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 LRRC25Q8N386 305 aaPredicted RBP9.48□□□□□ -0.89
CHFR-219ENST00000541341 CDRT4Q8N9R6 151 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 RCBTB1Q8NDN9 531 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 OR5D16Q8NGK9 328 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 OR14A16Q8NHC5 309 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 HSD17B8Q92506 261 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 PMEPA1Q969W9 287 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 GAL3ST3Q96A11 431 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 LIN37Q96GY3 246 aaPredicted RBP9.48□□□□□ -0.89
CHFR-219ENST00000541341 C10orf90Q96M02 699 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 DDOQ99489 341 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 SLC19A3Q9BZV2 496 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 SEMA6CQ9H3T2 930 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 ISG20L2Q9H9L3 353 aaKnown RBP9.48□□□□□ -0.89
CHFR-219ENST00000541341 ADGRL4Q9HBW9 690 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 TMEM138Q9NPI0 162 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 BIN3Q9NQY0 253 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 ST6GALNAC2Q9UJ37 374 aa9.48□□□□□ -0.89
CHFR-219ENST00000541341 ZNF223Q9UK11 482 aaPredicted RBP9.48□□□□□ -0.89
CHFR-219ENST00000541341 TNRC6AQ8NDV7 1962 aaKnown RBP9.48□□□□□ -0.89
CHFR-219ENST00000541341 PQLC2LA1A4F0 135 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 PRAMEF27A3QJZ7 478 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 A6NCN8 305 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 XRCC3O43542 346 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 B4GALT2O60909 372 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 SCGNO76038 276 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 NDUFB2O95178 105 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 EPPINO95925 133 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms