RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 TRBV5-5A0A0J9YX44 114 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 LINC00854A0A1B0GVQ3 168 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 NTN3O00634 580 aaPredicted RBP12.42□□□□□ -0.42
RTN3-210ENST00000540798 OR2T1O43869 369 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 TRIM3O75382 744 aaPredicted RBP12.42□□□□□ -0.42
RTN3-210ENST00000540798 DKK1O94907 266 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 PAHP00439 452 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 OR8G3PP0DMU2 310 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 PITPNBP48739 271 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 ZXDAP98168 799 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 ZP4Q12836 540 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 ALKBH1Q13686 389 aaKnown RBP12.42□□□□□ -0.42
RTN3-210ENST00000540798 NDUFA5Q16718 116 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 OR6F1Q8NGZ6 308 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 CEP76Q8TAP6 659 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 HSD17B8Q92506 261 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 INTS14Q96SY0 518 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 NOX4Q9NPH5 578 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 B9D1Q9UPM9 204 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 ASCC3Q8N3C0 2202 aaKnown RBP12.42□□□□□ -0.42
RTN3-210ENST00000540798 IGLV1-36A0A0B4J1U3 117 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 A0A0B4J293 547 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 TVP23AA6NH52 213 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 PHYHO14832 338 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 ARHGEF9O43307 516 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 SRMP19623 302 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 PTGDSP41222 190 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 CENPAP49450 140 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 SLC25A53Q5H9E4 307 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 LIPNQ5VXI9 398 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 OR5L2Q8NGL0 311 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 OR5H6Q8NGV6 325 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 SLC25A36Q96CQ1 311 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 NPAS1Q99742 590 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 WACQ9BTA9 647 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 OR11A1Q9GZK7 315 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 RNF121Q9H920 327 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 FRRS1LQ9P0K9 344 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 TMEM14AQ9Y6G1 99 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 A0A1W2PPK0 400 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 PSMD9O00233 223 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 LYRM1O43325 122 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 APOBEC1P41238 236 aaKnown RBP12.42□□□□□ -0.42
RTN3-210ENST00000540798 INSM1Q01101 510 aaPredicted RBP12.42□□□□□ -0.42
RTN3-210ENST00000540798 IL11RAQ14626 422 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 FDX2Q6P4F2 183 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 FAM220AQ7Z4H9 259 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 SYT9Q86SS6 491 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 BMPERQ8N8U9 685 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 OTOSQ8NHW6 89 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 WDR54Q9H977 334 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 COQ3Q9NZJ6 369 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 HRH3Q9Y5N1 445 aa12.42□□□□□ -0.42
RTN3-210ENST00000540798 NPIPB13A6NJU9 1138 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 NPIPB4C9JG80 1138 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 C11orf98E9PRG8 122 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 MEN1O00255 615 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 ZNF208O43345 1280 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 AHSA1O95433 338 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 PRKAR1AP10644 381 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 TALDO1P37837 337 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 DAB2P98082 770 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 HACD4Q5VWC8 232 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 PYHIN1Q6K0P9 492 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 MZT2BQ6NZ67 158 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 ZNF417Q8TAU3 575 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 ZNF587Q96SQ5 575 aaPredicted RBP12.41□□□□□ -0.42
RTN3-210ENST00000540798 LAMP5Q9UJQ1 280 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 SPATA2Q9UM82 520 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 A0A087WV48 116 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 HMX3A6NHT5 357 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 XKRYO14609 159 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 KRT8P05787 483 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 OR6N2Q8NGY6 317 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 MFSD8Q8NHS3 518 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 MED30Q96HR3 178 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 CRB3Q9BUF7 120 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 IRF2BPLQ9H1B7 796 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 GALNT9Q9HCQ5 603 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 FANCFQ9NPI8 374 aa12.41□□□□□ -0.42
RTN3-210ENST00000540798 PCDHGA9Q9Y5G4 932 aaKnown RBP12.41□□□□□ -0.42
RTN3-210ENST00000540798 SLC22A23A1A5C7 686 aa12.4□□□□□ -0.42
RTN3-210ENST00000540798 OR4C45A6NMZ5 311 aa12.4□□□□□ -0.42
RTN3-210ENST00000540798 MS4A18H0YCH9 400 aa12.4□□□□□ -0.42
RTN3-210ENST00000540798 LANCL1O43813 399 aa12.4□□□□□ -0.42
RTN3-210ENST00000540798 BLVRAP53004 296 aa12.4□□□□□ -0.42
RTN3-210ENST00000540798 MS4A18Q3C1V0 323 aa12.4□□□□□ -0.42
RTN3-210ENST00000540798 DPY19L4Q7Z388 723 aa12.4□□□□□ -0.42
RTN3-210ENST00000540798 YIPF7Q8N8F6 280 aa12.4□□□□□ -0.42
RTN3-210ENST00000540798 THAP3Q8WTV1 239 aaPredicted RBP12.4□□□□□ -0.42
RTN3-210ENST00000540798 DNAJA3Q96EY1 480 aa12.4□□□□□ -0.42
RTN3-210ENST00000540798 ABHD1Q96SE0 405 aa12.4□□□□□ -0.42
RTN3-210ENST00000540798 MYOTQ9UBF9 498 aa12.4□□□□□ -0.42
RTN3-210ENST00000540798 C19orf25Q9UFG5 118 aaPredicted RBP12.4□□□□□ -0.42
RTN3-210ENST00000540798 BOLA1Q9Y3E2 137 aa12.4□□□□□ -0.42
RTN3-210ENST00000540798 SPEF1Q9Y4P9 236 aa12.4□□□□□ -0.42
RTN3-210ENST00000540798 LOC102723996A0A087X1L8 192 aa12.4□□□□□ -0.42
RTN3-210ENST00000540798 D6RAR5 112 aa12.4□□□□□ -0.42
RTN3-210ENST00000540798 PDCD5O14737 125 aa12.4□□□□□ -0.42
RTN3-210ENST00000540798 LAMTOR5O43504 91 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms