RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ANXA8P13928 327 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 COX5AP20674 150 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 RPS6KA3P51812 740 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 FOXG1P55316 489 aaPredicted RBP13.64□□□□□ -0.23
DDB1-218ENST00000540784 FXYD6P3P58550 94 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 RUNX1T1Q06455 604 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 FAM205BPQ63HN1 556 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 GPR139Q6DWJ6 353 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 RPL13AP3Q6NVV1 102 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 CD300LDQ6UXZ3 194 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 LINGO2Q7L985 606 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 HIPK1Q86Z02 1210 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 ZDHHC13Q8IUH4 622 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 ATG16L2Q8NAA4 619 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 SYT14Q8NB59 555 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 FAM222BQ8WU58 562 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 HSD17B8Q92506 261 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 STMN2Q93045 179 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 S100PBPQ96BU1 408 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 Q96M85 177 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 ALKBH3Q96Q83 286 aaPredicted RBP13.64□□□□□ -0.23
DDB1-218ENST00000540784 TSPAN32Q96QS1 320 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 RBP7Q96R05 134 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 GPX7Q96SL4 187 aaPredicted RBP13.64□□□□□ -0.23
DDB1-218ENST00000540784 NIPSNAP1Q9BPW8 284 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 MED18Q9BUE0 208 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 IFT27Q9BW83 186 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 MRPL13Q9BYD1 178 aaKnown RBP13.64□□□□□ -0.23
DDB1-218ENST00000540784 SEMA6AQ9H2E6 1030 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 IL20Q9NYY1 176 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 CRIM1Q9NZV1 1036 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 POFUT2Q9Y2G5 429 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 ADAM18Q9Y3Q7 739 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 MAGED1Q9Y5V3 778 aaPredicted RBP13.64□□□□□ -0.23
DDB1-218ENST00000540784 USP9YO00507 2555 aaPredicted RBP13.64□□□□□ -0.23
DDB1-218ENST00000540784 HCFC1P51610 2035 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 H3BNX3 289 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 XKRYO14609 159 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 ARHGEF9O43307 516 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 RAD51DO75771 328 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 QDPRP09417 244 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 PGA4P0DJD7 388 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 PGA3P0DJD8 388 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 EPXP11678 715 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 ARF1P84077 181 aaKnown RBP13.63□□□□□ -0.23
DDB1-218ENST00000540784 GABRA6Q16445 453 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 CEACAM16Q2WEN9 425 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 HIST2H2BCQ6DN03 193 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 LRFN4Q6PJG9 635 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 ZNF620Q6ZNG0 422 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 P2RY8Q86VZ1 359 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 SVOPLQ8N434 492 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 CLDN22Q8N7P3 220 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 OR52L1Q8NGH7 329 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 HDAC2Q92769 488 aaKnown RBP13.63□□□□□ -0.23
DDB1-218ENST00000540784 ERMAPQ96PL5 475 aaPredicted RBP13.63□□□□□ -0.23
DDB1-218ENST00000540784 PKP2Q99959 881 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 ULBP2Q9BZM5 246 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 EGLN3Q9H6Z9 239 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 ZNF226Q9NYT6 803 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 KCNN3Q9UGI6 736 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 CDH10Q9Y6N8 788 aa13.63□□□□□ -0.23
DDB1-218ENST00000540784 UTP20O75691 2785 aaKnown RBP13.62□□□□□ -0.23
DDB1-218ENST00000540784 IMPA2O14732 288 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 IDH3BO43837 385 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 PPP1R3DO95685 299 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 APEHP13798 732 aaKnown RBP13.62□□□□□ -0.23
DDB1-218ENST00000540784 ZNF23P17027 643 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 SDHAP31040 664 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 CCKARP32238 428 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 SH3BGRP55822 239 aaPredicted RBP13.62□□□□□ -0.23
DDB1-218ENST00000540784 STK11Q15831 433 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 HIST3H3Q16695 136 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 TIMM23BQ5SRD1 257 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 THEM4Q5T1C6 240 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 FAM122BQ7Z309 247 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 C1orf162Q8NEQ5 155 aaPredicted RBP13.62□□□□□ -0.23
DDB1-218ENST00000540784 ZNF519Q8TB69 540 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 FNDC8Q8TC99 324 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 MCHR2Q969V1 340 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 MUCL1Q96DR8 90 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 ZNF837Q96EG3 531 aaPredicted RBP13.62□□□□□ -0.23
DDB1-218ENST00000540784 ZC3HAV1LQ96H79 300 aaKnown RBP13.62□□□□□ -0.23
DDB1-218ENST00000540784 ZNF570Q96NI8 536 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 KCNK17Q96T54 332 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 ALG12Q9BV10 488 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 TSSK6Q9BXA6 273 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 KIF17Q9P2E2 1029 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 DOPEY2Q9Y3R5 2298 aa13.62□□□□□ -0.23
DDB1-218ENST00000540784 ICE1Q9Y2F5 2266 aa13.61□□□□□ -0.23
DDB1-218ENST00000540784 TEX13CA0A0J9YWL9 993 aa13.61□□□□□ -0.23
DDB1-218ENST00000540784 OR5H1A6NKK0 313 aa13.61□□□□□ -0.23
DDB1-218ENST00000540784 H3BN98 237 aa13.61□□□□□ -0.23
DDB1-218ENST00000540784 SOCS2O14508 198 aa13.61□□□□□ -0.23
DDB1-218ENST00000540784 ARPC3O15145 178 aa13.61□□□□□ -0.23
DDB1-218ENST00000540784 DHHO43323 396 aa13.61□□□□□ -0.23
DDB1-218ENST00000540784 AHCYL1O43865 530 aa13.61□□□□□ -0.23
DDB1-218ENST00000540784 BAG2O95816 211 aa13.61□□□□□ -0.23
DDB1-218ENST00000540784 TXNDC12O95881 172 aa13.61□□□□□ -0.23
DDB1-218ENST00000540784 IGFBP1P08833 259 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms