RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 TAPBPLQ9BX59 468 aa9.44□□□□□ -0.9
ATL3-204ENST00000540699 AMBNQ9NP70 447 aa9.44□□□□□ -0.9
ATL3-204ENST00000540699 ALKBH4Q9NXW9 302 aa9.44□□□□□ -0.9
ATL3-204ENST00000540699 MRPL39Q9NYK5 338 aaKnown RBP9.44□□□□□ -0.9
ATL3-204ENST00000540699 TAS2R5Q9NYW4 299 aa9.44□□□□□ -0.9
ATL3-204ENST00000540699 SEC14L4Q9UDX3 406 aa9.44□□□□□ -0.9
ATL3-204ENST00000540699 HDGFL3Q9Y3E1 203 aa9.44□□□□□ -0.9
ATL3-204ENST00000540699 CORINQ9Y5Q5 1042 aa9.44□□□□□ -0.9
ATL3-204ENST00000540699 ANKHD1Q8IWZ3 2542 aaKnown RBP9.43□□□□□ -0.9
ATL3-204ENST00000540699 FREM1Q5H8C1 2179 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 LIPT2A6NK58 231 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 BLOC1S5-TXNDC5H3BN57 136 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 M0R082 166 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 PLPP3O14495 311 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 IMPA2O14732 288 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 TNFSF11O14788 317 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 DNPH1O43598 174 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 ZG16O60844 167 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 TGM6O95932 706 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 IGHMP01871 453 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 SFTPDP35247 375 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 IDUAP35475 653 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 CTXN1P60606 82 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 RAC3P60763 192 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 MVKQ03426 396 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 PMPCAQ10713 525 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 ZP4Q12836 540 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 CRMP1Q14194 572 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 IRF3Q14653 427 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 ZNF239Q16600 458 aaKnown RBP9.43□□□□□ -0.9
ATL3-204ENST00000540699 TMEM176BQ3YBM2 270 aaPredicted RBP9.43□□□□□ -0.9
ATL3-204ENST00000540699 ALG10Q5BKT4 473 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 SLC35F1Q5T1Q4 408 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 PDSS1Q5T2R2 415 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 FOXB2Q5VYV0 432 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 HBMQ6B0K9 141 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 GTF2IRD2BQ6EKJ0 949 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 NIPAL3Q6P499 406 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 NCCRP1Q6ZVX7 275 aaPredicted RBP9.43□□□□□ -0.9
ATL3-204ENST00000540699 CXXC5Q7LFL8 322 aaKnown RBP9.43□□□□□ -0.9
ATL3-204ENST00000540699 GTF2IRD2Q86UP8 949 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 ZNF808Q8N4W9 903 aaPredicted RBP9.43□□□□□ -0.9
ATL3-204ENST00000540699 SCAIQ8N9R8 606 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 C9orf106Q8NAJ2 232 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 SLC37A3Q8NCC5 494 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 ADPRHL1Q8NDY3 354 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 BBS1Q8NFJ9 593 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 ZNF417Q8TAU3 575 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 ITLN2Q8WWU7 325 aaPredicted RBP9.43□□□□□ -0.9
ATL3-204ENST00000540699 DNAJA3Q96EY1 480 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 ZNF845Q96IR2 970 aaPredicted RBP9.43□□□□□ -0.9
ATL3-204ENST00000540699 PLEKHA8Q96JA3 519 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 ERMAPQ96PL5 475 aaPredicted RBP9.43□□□□□ -0.9
ATL3-204ENST00000540699 TRIB1Q96RU8 372 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 ZNF587Q96SQ5 575 aaPredicted RBP9.43□□□□□ -0.9
ATL3-204ENST00000540699 TM9SF2Q99805 663 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 KATNB1Q9BVA0 655 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 HCAR1Q9BXC0 346 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 RNF122Q9H9V4 155 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 FANCFQ9NPI8 374 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 KLHL21Q9UJP4 597 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 TRAPPC4Q9Y296 219 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 ADAM18Q9Y3Q7 739 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 RPL36Q9Y3U8 105 aaKnown RBP9.43□□□□□ -0.9
ATL3-204ENST00000540699 IER3IP1Q9Y5U9 82 aa9.43□□□□□ -0.9
ATL3-204ENST00000540699 A0A0G2JNJ9 132 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 A0A1W2PNR3 127 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 CCDC182A6NF36 153 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 SLC22A20A6NK97 555 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 CXCL13O43927 109 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 PMS2P2O95744 297 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 IFNGP01579 166 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 OPN1LWP04000 364 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 HIST1H2ABP04908 130 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 FCGR2AP12318 317 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 HIST1H1CP16403 213 aaKnown RBP9.42□□□□□ -0.9
ATL3-204ENST00000540699 ZNF3P17036 446 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 SLC2A5P22732 501 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 C21orf33P30042 268 aaPredicted RBP9.42□□□□□ -0.9
ATL3-204ENST00000540699 CHRNB4P30926 498 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 HTR1FP30939 366 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 SDHAP31040 664 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 RPL4P36578 427 aaKnown RBP9.42□□□□□ -0.9
ATL3-204ENST00000540699 EIF1AXP47813 144 aaKnown RBP9.42□□□□□ -0.9
ATL3-204ENST00000540699 P2RY4P51582 365 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 AGFG1P52594 562 aaKnown RBP9.42□□□□□ -0.9
ATL3-204ENST00000540699 CARD18P57730 90 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 ERVK-25P63136 954 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 EMX1Q04741 257 aaPredicted RBP9.42□□□□□ -0.9
ATL3-204ENST00000540699 ST3GAL4Q11206 333 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 MYBPHQ13203 477 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 ITGADQ13349 1161 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 GUSBP1Q15486 140 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 OR7A5Q15622 319 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 TBCEQ15813 527 aaPredicted RBP9.42□□□□□ -0.9
ATL3-204ENST00000540699 RNLSQ5VYX0 342 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 PLBD1Q6P4A8 553 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 XKRXQ6PP77 449 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 TMPPEQ6ZT21 453 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 HIST3H2AQ7L7L0 130 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms