RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 KCTD12Q96CX2 325 aaKnown RBP9.34□□□□□ -0.91
VPS33A-204ENST00000540669 RASD2Q96D21 266 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 SLC25A44Q96H78 314 aaPredicted RBP9.34□□□□□ -0.91
VPS33A-204ENST00000540669 BOD1Q96IK1 185 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 TXNDC15Q96J42 360 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 LRR1Q96L50 414 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 TRIB1Q96RU8 372 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 NDEL1Q9GZM8 345 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 HINT3Q9NQE9 182 aaKnown RBP9.34□□□□□ -0.91
VPS33A-204ENST00000540669 ZNF226Q9NYT6 803 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 EMC3Q9P0I2 261 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 ZNF346Q9UL40 294 aaKnown RBP9.34□□□□□ -0.91
VPS33A-204ENST00000540669 LRRC42Q9Y546 428 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 ORC6Q9Y5N6 252 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 A0A1W2PRG6 482 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 SLC22A23A1A5C7 686 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 PRSS37A4D1T9 235 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 SLC35F4A4IF30 521 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 OR6C68A6NDL8 312 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 A6NIZ1 184 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 C11orf98E9PRG8 122 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 RPL36A-HNRNPH2H7BZ11 118 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 PYCARD-AS1I3L0S3 204 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 M0R129 80 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 DENRO43583 198 aaKnown RBP9.33□□□□□ -0.92
VPS33A-204ENST00000540669 PRKYO43930 277 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 WBP4O75554 376 aaKnown RBP9.33□□□□□ -0.92
VPS33A-204ENST00000540669 TRMUO75648 421 aaKnown RBP9.33□□□□□ -0.92
VPS33A-204ENST00000540669 SLC2A10O95528 541 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 CNOT4O95628 575 aaKnown RBP9.33□□□□□ -0.92
VPS33A-204ENST00000540669 PLGP00747 810 aaPredicted RBP9.33□□□□□ -0.92
VPS33A-204ENST00000540669 HMGN1P05114 100 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 CD8BP10966 210 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 COX5AP20674 150 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 NOS3P29474 1203 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 CDKN2AP42771 156 aaKnown RBP9.33□□□□□ -0.92
VPS33A-204ENST00000540669 OR3A2P47893 321 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 SELENOPP49908 381 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 RAP1BP61224 184 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 RAP1AP62834 184 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 FOXF2Q12947 444 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 MRPL49Q13405 166 aaKnown RBP9.33□□□□□ -0.92
VPS33A-204ENST00000540669 CRMP1Q14194 572 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 MELKQ14680 651 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 LINC01590Q5TEZ4 76 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 TMEM225Q6GV28 225 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 ZNF585AQ6P3V2 769 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 TFAP2EQ6VUC0 442 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 LINGO2Q7L985 606 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 TUSC5Q8IXB3 177 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 C20orf196Q8IYI0 205 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 DHRSXQ8N5I4 330 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 SLC37A3Q8NCC5 494 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 OR8J1Q8NGP2 316 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 OR6K3Q8NGY3 331 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 TMEM163Q8TC26 289 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 TRUB1Q8WWH5 349 aaKnown RBP9.33□□□□□ -0.92
VPS33A-204ENST00000540669 ERMAPQ96PL5 475 aaPredicted RBP9.33□□□□□ -0.92
VPS33A-204ENST00000540669 IFT27Q9BW83 186 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 HCAR1Q9BXC0 346 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 RACGAP1Q9H0H5 632 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 MARCH7Q9H992 704 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 JKAMPQ9P055 326 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 KLHL21Q9UJP4 597 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 RNF6Q9Y252 685 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 SLC5A6Q9Y289 635 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 MEMO1Q9Y316 297 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 UGT2A1Q9Y4X1 527 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 IER3IP1Q9Y5U9 82 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 CACNA1CQ13936 2221 aa9.33□□□□□ -0.92
VPS33A-204ENST00000540669 COL12A1Q99715 3063 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 IGKV1D-43A0A0B4J1Z2 117 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 A0A0G2JNJ9 132 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 CCDC182A6NF36 153 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 TRIM64A6NGJ6 449 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 DCTN6O00399 190 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 AKAP8O43823 692 aaKnown RBP9.32□□□□□ -0.92
VPS33A-204ENST00000540669 OR6A2O95222 327 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 CLIC3O95833 236 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 BCL10O95999 233 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 GAAP10253 952 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 ACADSP16219 412 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 OPRM1P35372 400 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 RPL4P36578 427 aaKnown RBP9.32□□□□□ -0.92
VPS33A-204ENST00000540669 BIDP55957 195 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 CLDN17P56750 224 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 MYBPC1Q00872 1141 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.32□□□□□ -0.92
VPS33A-204ENST00000540669 CD47Q08722 323 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 MAD2L1BPQ15013 274 aaPredicted RBP9.32□□□□□ -0.92
VPS33A-204ENST00000540669 OCLNQ16625 522 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 PHYHD1Q5SRE7 291 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 C6orf52Q5T4I8 152 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 EEF1A1P5Q5VTE0 462 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 NIPAL3Q6P499 406 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 SLC25A47Q6Q0C1 308 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 NUFIP2Q7Z417 695 aaKnown RBP9.32□□□□□ -0.92
VPS33A-204ENST00000540669 GPAT4Q86UL3 456 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 FAM81AQ8TBF8 368 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 FNDC8Q8TC99 324 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms