RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 LEG1Q6P5S2 330 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 H1FNTQ75WM6 255 aaPredicted RBP15.19■□□□□ 0.02
COPS3-212ENST00000539941 ZNF227Q86WZ6 799 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 ACBD7Q8N6N7 88 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 POMGNT2Q8NAT1 580 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 ZNF248Q8NDW4 579 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 OR51G2Q8NGK0 314 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 TXNIPQ9H3M7 391 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 CHST11Q9NPF2 352 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 FANCFQ9NPI8 374 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 ANKRD10Q9NXR5 420 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 LRFN1Q9P244 771 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 B3GALT5Q9Y2C3 310 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 MSRB2Q9Y3D2 182 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 OR6C68A6NDL8 312 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 SHISA8B8ZZ34 492 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 H3BML4 177 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 SBK2P0C263 348 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 HSMCR30P0CW71 290 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 CTRB1P17538 263 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 IL11P20809 199 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 CNR1P21554 472 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 SRD5A2P31213 254 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 CDKN2AP42771 156 aaKnown RBP15.18■□□□□ 0.02
COPS3-212ENST00000539941 SLC16A1P53985 500 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 RPL27P61353 136 aaKnown RBP15.18■□□□□ 0.02
COPS3-212ENST00000539941 ACTC1P68032 377 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 ACTA1P68133 377 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 GALK2Q01415 458 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 PUDPQ08623 228 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 MYBPHQ13203 477 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 PON3Q15166 354 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 OR7A5Q15622 319 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 ST3GAL2Q16842 350 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 STEAP3Q658P3 488 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 CTRB2Q6GPI1 263 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 SHFQ7M4L6 423 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 UBQLNLQ8IYU4 475 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 ARIH2OSQ8N7S6 290 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 OR9Q1Q8NGQ5 310 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 OR52N1Q8NH53 320 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 NXPE2Q96DL1 559 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 JSRP1Q96MG2 331 aaPredicted RBP15.18■□□□□ 0.02
COPS3-212ENST00000539941 GNRHR2Q96P88 292 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 TMEM246Q9BRR3 403 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 CCDC32Q9BV29 185 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 ADGRL4Q9HBW9 690 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 ERVK13-1Q9NX77 482 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 RABL2AQ9UBK7 228 aaPredicted RBP15.18■□□□□ 0.02
COPS3-212ENST00000539941 FBXO9Q9UK97 447 aaPredicted RBP15.18■□□□□ 0.02
COPS3-212ENST00000539941 NUP50Q9UKX7 468 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 ZNF346Q9UL40 294 aaKnown RBP15.18■□□□□ 0.02
COPS3-212ENST00000539941 MOKQ9UQ07 419 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 MRPS18CQ9Y3D5 142 aaKnown RBP15.18■□□□□ 0.02
COPS3-212ENST00000539941 CACNA1BQ00975 2339 aa15.18■□□□□ 0.02
COPS3-212ENST00000539941 ZZEF1O43149 2961 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 A0A1W2PRG6 482 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 G3V3Y1 287 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 ZIC3O60481 467 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 RENP00797 406 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 CLUP10909 449 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 SPI1P17947 270 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 CD96P40200 585 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 DNASE1L1P49184 302 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 DIO1P49895 249 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 OR2B6P58173 313 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 TIMM50Q3ZCQ8 353 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 MESTQ5EB52 335 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 C19orf48Q6RUI8 117 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 PAQR6Q6TCH4 344 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 CCBE1Q6UXH8 406 aaPredicted RBP15.17■□□□□ 0.02
COPS3-212ENST00000539941 UNQ6494/PRO21346Q6UXR6 183 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 KLHL36Q8N4N3 616 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 EXD3Q8N9H8 876 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 ATP6V1C2Q8NEY4 427 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 NDNFQ8TB73 568 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 OPALINQ96PE5 141 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 ZNF649Q9BS31 505 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 POLE4Q9NR33 117 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 SEC14L4Q9UDX3 406 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 TRAPPC4Q9Y296 219 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 PCDHGB7Q9Y5F8 929 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 DMXL2Q8TDJ6 3036 aa15.17■□□□□ 0.02
COPS3-212ENST00000539941 A0A1W2PNV4 684 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 C11orf98E9PRG8 122 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 XKRYO14609 159 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 GLCEO94923 617 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 AHCYP23526 432 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 TLE3Q04726 772 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 ACKR1Q16570 336 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 YIF1BQ5BJH7 314 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 FAM205BPQ63HN1 556 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 GALNT16Q8N428 558 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 KDF1Q8NAX2 398 aaPredicted RBP15.16■□□□□ 0.02
COPS3-212ENST00000539941 ZNF519Q8TB69 540 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 ZHX1-C8orf76Q96EF9 292 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 CNN2Q99439 309 aaKnown RBP15.16■□□□□ 0.02
COPS3-212ENST00000539941 PIGQQ9BRB3 760 aa15.16■□□□□ 0.02
COPS3-212ENST00000539941 TRAF4Q9BUZ4 470 aaPredicted RBP15.16■□□□□ 0.02
COPS3-212ENST00000539941 NXF2Q9GZY0 626 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms