RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 MS4A3Q96HJ5 214 aa19.2■□□□□ 0.66
SCARB1-206ENST00000539320 PRSS27Q9BQR3 290 aa19.2■□□□□ 0.66
SCARB1-206ENST00000539320 DYNLRB1Q9NP97 96 aa19.2■□□□□ 0.66
SCARB1-206ENST00000539320 SAR1AQ9NR31 198 aa19.2■□□□□ 0.66
SCARB1-206ENST00000539320 TAS2R5Q9NYW4 299 aa19.2■□□□□ 0.66
SCARB1-206ENST00000539320 GLTPQ9NZD2 209 aa19.2■□□□□ 0.66
SCARB1-206ENST00000539320 ZNF224Q9NZL3 707 aa19.2■□□□□ 0.66
SCARB1-206ENST00000539320 MALRD1Q5VYJ5 2156 aa19.19■□□□□ 0.66
SCARB1-206ENST00000539320 LOC390937A0A1W2PQ73 354 aa19.19■□□□□ 0.66
SCARB1-206ENST00000539320 UBL3O95164 117 aa19.19■□□□□ 0.66
SCARB1-206ENST00000539320 NPPAP01160 153 aa19.19■□□□□ 0.66
SCARB1-206ENST00000539320 HIST1H2ABP04908 130 aa19.19■□□□□ 0.66
SCARB1-206ENST00000539320 ERCC1P07992 297 aaPredicted RBP19.19■□□□□ 0.66
SCARB1-206ENST00000539320 ASAH2BP0C7U1 165 aa19.19■□□□□ 0.66
SCARB1-206ENST00000539320 ZNF14P17017 642 aaPredicted RBP19.19■□□□□ 0.66
SCARB1-206ENST00000539320 GIPRP48546 466 aa19.19■□□□□ 0.66
SCARB1-206ENST00000539320 PTDSS1P48651 473 aaKnown RBP19.19■□□□□ 0.66
SCARB1-206ENST00000539320 LSM11P83369 360 aaKnown RBP eCLIP19.19■□□□□ 0.66
SCARB1-206ENST00000539320 PIGFQ07326 219 aa19.19■□□□□ 0.66
SCARB1-206ENST00000539320 SF3A3Q12874 501 aaKnown RBP eCLIP19.19■□□□□ 0.66
SCARB1-206ENST00000539320 CYB5R2Q6BCY4 276 aa19.19■□□□□ 0.66
SCARB1-206ENST00000539320 HIST3H2AQ7L7L0 130 aa19.19■□□□□ 0.66
SCARB1-206ENST00000539320 LRRC17Q8N6Y2 441 aa19.19■□□□□ 0.66
SCARB1-206ENST00000539320 HIST1H2ACQ93077 130 aa19.19■□□□□ 0.66
SCARB1-206ENST00000539320 ZNF566Q969W8 418 aa19.19■□□□□ 0.66
SCARB1-206ENST00000539320 DOK1Q99704 481 aa19.19■□□□□ 0.66
SCARB1-206ENST00000539320 DENND2DQ9H6A0 471 aaPredicted RBP19.19■□□□□ 0.66
SCARB1-206ENST00000539320 SH3GLB1Q9Y371 365 aa19.19■□□□□ 0.66
SCARB1-206ENST00000539320 TNFRSF1BP20333 461 aa19.18■□□□□ 0.66
SCARB1-206ENST00000539320 NR4A1P22736 598 aa19.18■□□□□ 0.66
SCARB1-206ENST00000539320 GZMKP49863 264 aa19.18■□□□□ 0.66
SCARB1-206ENST00000539320 TAS2R41P59536 307 aa19.18■□□□□ 0.66
SCARB1-206ENST00000539320 DEF8Q6ZN54 512 aa19.18■□□□□ 0.66
SCARB1-206ENST00000539320 CDK20Q8IZL9 346 aa19.18■□□□□ 0.66
SCARB1-206ENST00000539320 SLC25A44Q96H78 314 aaPredicted RBP19.18■□□□□ 0.66
SCARB1-206ENST00000539320 ZNF75AQ96N20 296 aa19.18■□□□□ 0.66
SCARB1-206ENST00000539320 POLR2J2Q9GZM3 115 aaKnown RBP19.18■□□□□ 0.66
SCARB1-206ENST00000539320 POLR2J3Q9H1A7 115 aaKnown RBP19.18■□□□□ 0.66
SCARB1-206ENST00000539320 MEPEQ9NQ76 525 aaPredicted RBP19.18■□□□□ 0.66
SCARB1-206ENST00000539320 FBXL3Q9UKT7 428 aa19.18■□□□□ 0.66
SCARB1-206ENST00000539320 CMAHPQ9Y471 501 aa19.18■□□□□ 0.66
SCARB1-206ENST00000539320 TMEM129A0AVI4 362 aa19.17■□□□□ 0.66
SCARB1-206ENST00000539320 FAM220BPB1ANY3 271 aa19.17■□□□□ 0.66
SCARB1-206ENST00000539320 ENTPD5O75356 428 aa19.17■□□□□ 0.66
SCARB1-206ENST00000539320 OR5F1O95221 314 aa19.17■□□□□ 0.66
SCARB1-206ENST00000539320 IFNA2P01563 188 aa19.17■□□□□ 0.66
SCARB1-206ENST00000539320 IFNA14P01570 189 aa19.17■□□□□ 0.66
SCARB1-206ENST00000539320 RBM34P42696 430 aaKnown RBP19.17■□□□□ 0.66
SCARB1-206ENST00000539320 UGT2B15P54855 530 aa19.17■□□□□ 0.66
SCARB1-206ENST00000539320 RAB1AP62820 205 aa19.17■□□□□ 0.66
SCARB1-206ENST00000539320 PIWIL3Q7Z3Z3 882 aaKnown RBP19.17■□□□□ 0.66
SCARB1-206ENST00000539320 PCYOX1LQ8NBM8 494 aa19.17■□□□□ 0.66
SCARB1-206ENST00000539320 NEU4Q8WWR8 484 aaPredicted RBP19.17■□□□□ 0.66
SCARB1-206ENST00000539320 FOXN4Q96NZ1 517 aa19.17■□□□□ 0.66
SCARB1-206ENST00000539320 KCNK17Q96T54 332 aa19.17■□□□□ 0.66
SCARB1-206ENST00000539320 BPESC1Q9GZL8 116 aa19.17■□□□□ 0.66
SCARB1-206ENST00000539320 GID8Q9NWU2 228 aa19.17■□□□□ 0.66
SCARB1-206ENST00000539320 TMEM160Q9NX00 188 aa19.17■□□□□ 0.66
SCARB1-206ENST00000539320 CDC42EP3Q9UKI2 254 aa19.17■□□□□ 0.66
SCARB1-206ENST00000539320 SPEF1Q9Y4P9 236 aa19.17■□□□□ 0.66
SCARB1-206ENST00000539320 CAPN7Q9Y6W3 813 aa19.17■□□□□ 0.66
SCARB1-206ENST00000539320 IGHV4-61A0A0C4DH41 118 aa19.16■□□□□ 0.66
SCARB1-206ENST00000539320 DHHO43323 396 aa19.16■□□□□ 0.66
SCARB1-206ENST00000539320 BCL10O95999 233 aa19.16■□□□□ 0.66
SCARB1-206ENST00000539320 IGHG1P01857 330 aa19.16■□□□□ 0.66
SCARB1-206ENST00000539320 MT-ND1P03886 318 aa19.16■□□□□ 0.66
SCARB1-206ENST00000539320 PGA4P0DJD7 388 aa19.16■□□□□ 0.66
SCARB1-206ENST00000539320 PGA3P0DJD8 388 aa19.16■□□□□ 0.66
SCARB1-206ENST00000539320 ZNF35P13682 527 aa19.16■□□□□ 0.66
SCARB1-206ENST00000539320 APEHP13798 732 aaKnown RBP19.16■□□□□ 0.66
SCARB1-206ENST00000539320 RPS23P62266 143 aaKnown RBP19.16■□□□□ 0.66
SCARB1-206ENST00000539320 LRRC23Q53EV4 343 aaPredicted RBP19.16■□□□□ 0.66
SCARB1-206ENST00000539320 PODNL1Q6PEZ8 512 aa19.16■□□□□ 0.66
SCARB1-206ENST00000539320 CXXC5Q7LFL8 322 aaKnown RBP19.16■□□□□ 0.66
SCARB1-206ENST00000539320 NKAIN4Q8IVV8 208 aa19.16■□□□□ 0.66
SCARB1-206ENST00000539320 NOXO1Q8NFA2 376 aa19.16■□□□□ 0.66
SCARB1-206ENST00000539320 PFN4Q8NHR9 129 aa19.16■□□□□ 0.66
SCARB1-206ENST00000539320 MRPL24Q96A35 216 aaKnown RBP19.16■□□□□ 0.66
SCARB1-206ENST00000539320 ZNF583Q96ND8 569 aa19.16■□□□□ 0.66
SCARB1-206ENST00000539320 TMEM38BQ9NVV0 291 aa19.16■□□□□ 0.66
SCARB1-206ENST00000539320 MCIDASD6RGH6 385 aa19.15■□□□□ 0.66
SCARB1-206ENST00000539320 SHOX2O60902 331 aaPredicted RBP19.15■□□□□ 0.66
SCARB1-206ENST00000539320 OR7A10O76100 309 aa19.15■□□□□ 0.66
SCARB1-206ENST00000539320 LSP1P33241 339 aa19.15■□□□□ 0.66
SCARB1-206ENST00000539320 GALK2Q01415 458 aa19.15■□□□□ 0.66
SCARB1-206ENST00000539320 RPL18Q07020 188 aaKnown RBP19.15■□□□□ 0.66
SCARB1-206ENST00000539320 RAB39AQ14964 217 aa19.15■□□□□ 0.66
SCARB1-206ENST00000539320 MSMPQ1L6U9 139 aa19.15■□□□□ 0.66
SCARB1-206ENST00000539320 IQCCQ4KMZ1 466 aa19.15■□□□□ 0.66
SCARB1-206ENST00000539320 SKA3Q8IX90 412 aa19.15■□□□□ 0.66
SCARB1-206ENST00000539320 SLC22A24Q8N4F4 322 aa19.15■□□□□ 0.66
SCARB1-206ENST00000539320 ZNF540Q8NDQ6 660 aa19.15■□□□□ 0.66
SCARB1-206ENST00000539320 TMEM255BQ8WV15 326 aa19.15■□□□□ 0.66
SCARB1-206ENST00000539320 C10orf82Q8WW14 230 aa19.15■□□□□ 0.66
SCARB1-206ENST00000539320 SGTBQ96EQ0 304 aa19.15■□□□□ 0.66
SCARB1-206ENST00000539320 MRPL37Q9BZE1 423 aaKnown RBP19.15■□□□□ 0.66
SCARB1-206ENST00000539320 RIMS3Q9UJD0 308 aa19.15■□□□□ 0.66
SCARB1-206ENST00000539320 LOC100653049A0A140TA62 436 aa19.14■□□□□ 0.65
SCARB1-206ENST00000539320 A0A1W2PRG6 482 aa19.14■□□□□ 0.65
SCARB1-206ENST00000539320 SH3PXD2BA1X283 911 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms