RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ZNF584Q8IVC4 421 aa10.76□□□□□ -0.69
VAMP1-206ENST00000538970 C11orf65Q8NCR3 313 aa10.76□□□□□ -0.69
VAMP1-206ENST00000538970 GPR32P1Q8NGA4 272 aa10.76□□□□□ -0.69
VAMP1-206ENST00000538970 TMEM54Q969K7 222 aa10.76□□□□□ -0.69
VAMP1-206ENST00000538970 SYT3Q9BQG1 590 aa10.76□□□□□ -0.69
VAMP1-206ENST00000538970 MYEF2Q9P2K5 600 aaKnown RBP10.76□□□□□ -0.69
VAMP1-206ENST00000538970 REV1Q9UBZ9 1251 aa10.76□□□□□ -0.69
VAMP1-206ENST00000538970 FBXL3Q9UKT7 428 aa10.76□□□□□ -0.69
VAMP1-206ENST00000538970 SPEF1Q9Y4P9 236 aa10.76□□□□□ -0.69
VAMP1-206ENST00000538970 CPSF4LA6NMK7 179 aaKnown RBP10.75□□□□□ -0.69
VAMP1-206ENST00000538970 C11orf98E9PRG8 122 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 LYPD3O95274 346 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 HPXP02790 462 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 THY1P04216 161 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 ALDH3B1P43353 468 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 MTPNP58546 118 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 RPS23P62266 143 aaKnown RBP10.75□□□□□ -0.69
VAMP1-206ENST00000538970 GALK2Q01415 458 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 RBBP4Q09028 425 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 CCNIQ14094 377 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 SELPLGQ14242 412 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 RAB39AQ14964 217 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 MAD2L1BPQ15013 274 aaPredicted RBP10.75□□□□□ -0.69
VAMP1-206ENST00000538970 ZNF74Q16587 644 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 DUSP7Q16829 419 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 CYP51A1Q16850 503 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 ENTPD8Q5MY95 495 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 ELFN2Q5R3F8 820 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 GKAP1Q5VSY0 366 aaPredicted RBP10.75□□□□□ -0.69
VAMP1-206ENST00000538970 UGT2A3Q6UWM9 527 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 PIWIL3Q7Z3Z3 882 aaKnown RBP10.75□□□□□ -0.69
VAMP1-206ENST00000538970 DHDDSQ86SQ9 333 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 LRP11Q86VZ4 500 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 RFLNBQ8N5W9 214 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 OR6T1Q8NGN1 323 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 OR6X1Q8NH79 312 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 MS4A5Q9H3V2 200 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 GLTPQ9NZD2 209 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 SLC7A8Q9UHI5 535 aa10.75□□□□□ -0.69
VAMP1-206ENST00000538970 TMEFF2Q9UIK5 374 aaPredicted RBP10.75□□□□□ -0.69
VAMP1-206ENST00000538970 LEF1Q9UJU2 399 aaPredicted RBP10.75□□□□□ -0.69
VAMP1-206ENST00000538970 M0QX08 132 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 OR6A2O95222 327 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 PATE4P0C8F1 98 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 TCN1P20061 433 aaPredicted RBP10.74□□□□□ -0.69
VAMP1-206ENST00000538970 SEC24CP53992 1094 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 DVL1P1P54792 670 aaPredicted RBP10.74□□□□□ -0.69
VAMP1-206ENST00000538970 ZP4Q12836 540 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 MELKQ14680 651 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 LIPNQ5VXI9 398 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 SLC35D2Q76EJ3 337 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 RETREG3Q86VR2 466 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 TSPYL5Q86VY4 417 aaPredicted RBP10.74□□□□□ -0.69
VAMP1-206ENST00000538970 RBM45Q8IUH3 476 aaKnown RBP10.74□□□□□ -0.69
VAMP1-206ENST00000538970 SKA3Q8IX90 412 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 SLC22A24Q8N4F4 322 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 DPP10Q8N608 796 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 OR4D11Q8NGI4 311 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 FGFBP3Q8TAT2 258 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 ADAMTS16Q8TE57 1224 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 STON2Q8WXE9 905 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 CGREF1Q99674 301 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 ZNF426Q9BUY5 554 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 PLA2G12AQ9BZM1 189 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 RABEP2Q9H5N1 569 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 ZNF385DQ9H6B1 395 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 TMEM38BQ9NVV0 291 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 TAS2R5Q9NYW4 299 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 ZNF229Q9UJW7 825 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 FZR1Q9UM11 496 aa10.74□□□□□ -0.69
VAMP1-206ENST00000538970 KPNA4O00629 521 aaPredicted RBP10.73□□□□□ -0.69
VAMP1-206ENST00000538970 SPRY1O43609 319 aaPredicted RBP10.73□□□□□ -0.69
VAMP1-206ENST00000538970 TCF21O43680 179 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 NCR1O76036 304 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 CH25HO95992 272 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 SERPINA5P05154 406 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 PGA4P0DJD7 388 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 PGA3P0DJD8 388 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 CD247P20963 164 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 ACHEP22303 614 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 COL8A2P25067 703 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 LSP1P33241 339 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 SRP14P37108 136 aaKnown RBP10.73□□□□□ -0.69
VAMP1-206ENST00000538970 GPR6P46095 362 aaPredicted RBP10.73□□□□□ -0.69
VAMP1-206ENST00000538970 TTMPQ5BVD1 217 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 REP15Q6BDI9 236 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 TTC33Q6PID6 262 aaPredicted RBP10.73□□□□□ -0.69
VAMP1-206ENST00000538970 LRFN4Q6PJG9 635 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 RINLQ6ZS11 566 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 CARM1Q86X55 608 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 LRRC17Q8N6Y2 441 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 CLDND2Q8NHS1 167 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 VANGL1Q8TAA9 524 aaPredicted RBP10.73□□□□□ -0.69
VAMP1-206ENST00000538970 RDH5Q92781 318 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 ZNF566Q969W8 418 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 TAMM41Q96BW9 452 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 SLC25A44Q96H78 314 aaPredicted RBP10.73□□□□□ -0.69
VAMP1-206ENST00000538970 ATP6V1G3Q96LB4 118 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 SLC19A3Q9BZV2 496 aa10.73□□□□□ -0.69
VAMP1-206ENST00000538970 RACGAP1Q9H0H5 632 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms