RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 FUT4P22083 530 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 IGFBP5P24593 272 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 PTDSS1P48651 473 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 RAD23AP54725 363 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 CTBP2P56545 445 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 B3GALT5-AS1P59052 145 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 LOXL1Q08397 574 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 OR7A5Q15622 319 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 TMEM44Q2T9K0 475 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 PGGHGQ32M88 737 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 HBMQ6B0K9 141 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 ESPNLQ6ZVH7 1005 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 P4HA3Q7Z4N8 544 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 NANOGNBQ7Z5D8 188 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 MEX3DQ86XN8 651 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 EPHX4Q8IUS5 362 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 SMAP2Q8WU79 429 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 NEUROG1Q92886 237 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 ZNF426Q9BUY5 554 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 COQ10BQ9H8M1 238 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 SMURF2Q9HAU4 748 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 MEPEQ9NQ76 525 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 TIGARQ9NQ88 270 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 NANSQ9NR45 359 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 PAPOLBQ9NRJ5 636 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 C20orf141Q9NUB4 165 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 ENOPH1Q9UHY7 261 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 POFUT2Q9Y2G5 429 aa11.01□□□□□ -0.65
CLSTN3-208ENST00000538933 UNC119BA6NIH7 251 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 H3BN98 237 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 SOCS2O14508 198 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 TNFSF11O14788 317 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 EFNA2O43921 213 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 OR7A10O76100 309 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 SYNGR4O95473 234 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 HPRP00739 348 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 SRD5A1P18405 259 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 VHLP40337 213 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 EIF1AXP47813 144 aaKnown RBP11□□□□□ -0.65
CLSTN3-208ENST00000538933 OMPP47874 163 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 SLC9A3P48764 834 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 ALDH3A2P51648 485 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 SLC35A1P78382 337 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 LSM11P83369 360 aaKnown RBP eCLIP11□□□□□ -0.65
CLSTN3-208ENST00000538933 EGR4Q05215 589 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 TSPAN31Q12999 210 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 ZNF74Q16587 644 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 OGFRL1Q5TC84 451 aaPredicted RBP11□□□□□ -0.65
CLSTN3-208ENST00000538933 C1orf94Q6P1W5 598 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 ZER1Q7Z7L7 766 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 GALNT5Q7Z7M9 940 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 OAFQ86UD1 273 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 PACRGLQ8N7B6 248 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 OR52L1Q8NGH7 329 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 OR2V1Q8NHB1 315 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 MFSD8Q8NHS3 518 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 TAAR8Q969N4 342 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 ARL5BQ96KC2 179 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 PSD2Q9BQI7 771 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 NAA11Q9BSU3 229 aaPredicted RBP11□□□□□ -0.65
CLSTN3-208ENST00000538933 FUZQ9BT04 418 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 DGCR6LQ9BY27 220 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 FKRPQ9H9S5 495 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 PLSCR4Q9NRQ2 329 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 ZNF229Q9UJW7 825 aa11□□□□□ -0.65
CLSTN3-208ENST00000538933 LRRN3E7EW58 273 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 H0YC42 278 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 IGF2P01344 180 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 MAKP20794 623 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 FPR3P25089 353 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 SHC1P29353 583 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 GRPRP30550 384 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 DIO1P49895 249 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 SUCLG1P53597 346 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 TPD52P55327 224 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 CARD18P57730 90 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 COX10Q12887 443 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 PMS2P3Q13401 168 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 RFX4Q33E94 735 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 RPL13AP3Q6NVV1 102 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 TMPPEQ6ZT21 453 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 TMPRSS11FQ6ZWK6 438 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 LSRQ86X29 649 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 WFDC8Q8IUA0 241 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 OR13C2Q8NGS9 318 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 OR6S1Q8NH40 331 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 OR51A7Q8NH64 312 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 TEX47Q8TBZ9 253 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 FANK1Q8TC84 345 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 FBXW5Q969U6 566 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 NIPSNAP1Q9BPW8 284 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 RHNO1Q9BSD3 238 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 TACO1Q9BSH4 297 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 TRAF4Q9BUZ4 470 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 PRRG4Q9BZD6 226 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 RIBC2Q9H4K1 309 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 TBC1D23Q9NUY8 699 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 PAQR5Q9NXK6 330 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 USE1Q9NZ43 259 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 PROCRQ9UNN8 238 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms