RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 WNT2BQ93097 391 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 ARL11Q969Q4 196 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 ADAP2Q9NPF8 381 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 FRRS1LQ9P0K9 344 aa16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 C19orf53Q9UNZ5 99 aaPredicted RBP16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 NOSIPQ9Y314 301 aaKnown RBP16.93■□□□□ 0.3
SFSWAP-207ENST00000538548 IMPA2O14732 288 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 RDH16O75452 317 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 UPK3AO75631 287 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 OR8G3PP0DMU2 310 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 RPL4P36578 427 aaKnown RBP16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 TRMT12Q53H54 448 aaKnown RBP16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 ALG10BQ5I7T1 473 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 EXOSC6Q5RKV6 272 aaKnown RBP16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 MFSD9Q8NBP5 474 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 OR1J2Q8NGS2 313 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 OR6S1Q8NH40 331 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 ZPLD1Q8TCW7 415 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 PPP1R1CQ8WVI7 109 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 ZNF558Q96NG5 402 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 RAB11FIP5Q9BXF6 653 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 RXFP3Q9NSD7 469 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 TICRRQ7Z2Z1 1910 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 OR2W5A6NFC9 320 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 OR2AT4A6NND4 320 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 SRPX2O60687 465 aaPredicted RBP16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 GLCEO94923 617 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 RAB3DO95716 219 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 CFPP27918 469 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 CCR2P41597 374 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 PDZK1IP1Q13113 114 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 ATXN7L3Q14CW9 347 aaPredicted RBP16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 INPP5JQ15735 1006 aaPredicted RBP16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 DPY19L2P2Q6ZN68 376 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 GTPBP8Q8N3Z3 284 aaPredicted RBP16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 OR2L3Q8NG85 312 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 NANPQ8TBE9 248 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 PTCHD1Q96NR3 888 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 SEC11CQ9BY50 192 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 TRPV4Q9HBA0 871 aa16.92■□□□□ 0.3
SFSWAP-207ENST00000538548 SCN3AQ9NY46 2000 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 TRBV5-7A0A0A0MS05 114 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 OR6C76A6NM76 312 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 SULT2B1O00204 365 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 SGCEO43556 437 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 FADS1O60427 444 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 FGF18O76093 207 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 AKR7A3O95154 331 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 NPBWR1P48145 328 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 POU3F4P49335 361 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 ATPAF1Q5TC12 328 aaPredicted RBP16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 FIGNL1Q6PIW4 674 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 TMEM205Q6UW68 189 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 OR4N5Q8IXE1 308 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 PMM1Q92871 262 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 CNTNAP3BQ96NU0 1288 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 ZNF251Q9BRH9 671 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 CRB3Q9BUF7 120 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 ARPC3O15145 178 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 CDC40O60508 579 aaKnown RBP eCLIP16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 ZNF432O94892 652 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 S100A8P05109 93 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 CDK3Q00526 305 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 TMEM52BQ4KMG9 183 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 LINC01590Q5TEZ4 76 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 BIVMQ86UB2 503 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 ZFP82Q8N141 532 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 CDRT4Q8N9R6 151 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 TMEM229BQ8NBD8 167 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 TMEM106AQ96A25 262 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 STACQ99469 402 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 TRIM2Q9C040 744 aa16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 MRM2Q9UI43 246 aaKnown RBP16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 NOP16Q9Y3C1 178 aaKnown RBP16.91■□□□□ 0.3
SFSWAP-207ENST00000538548 TMEM200CA6NKL6 621 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 ATP1B3P54709 279 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 ZNF234Q14588 700 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 NDUFAF7Q7L592 441 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 ZNF595Q8IYB9 648 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 INO80EQ8NBZ0 244 aaPredicted RBP16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 STOML3Q8TAV4 291 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 GAL3ST3Q96A11 431 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 ALG12Q9BV10 488 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 FBXO4Q9UKT5 387 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 PRICKLE3O43900 615 aaPredicted RBP16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 BRINP1O60477 761 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 LDB3O75112 727 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 AK1P00568 194 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 CD79AP11912 226 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 ABOP16442 354 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 CAPZA1P52907 286 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 PNLIPRP2P54317 469 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 NR0B2Q15466 257 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 FHL5Q5TD97 284 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 ELP5Q8TE02 316 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 SLC17A5Q9NRA2 495 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 TMEM100Q9NV29 134 aa16.9■□□□□ 0.3
SFSWAP-207ENST00000538548 TRAV20A0A0B4J274 112 aa16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.89■□□□□ 0.29
SFSWAP-207ENST00000538548 TMEM72A0PK05 275 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms